| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3295 |
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| Symbol | |
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| ID | 5612201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4003559 |
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| End bp | 4004938 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934233 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001475027 |
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| Protein GI | 157376427 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000351014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAACTCGA GCCAAAGTAA CTCCACCCCA AAAGACTTAC TCTCAATAAC AGATGTACAA
GCCGAGACCA CGTCTCAGAA GCGGGCACTG AGCTACGCCA ATACCATATA TCTGCTGTTT
CATCAGGTTA TGGATAAGCA GCAACCCGCC GATCGTGTCG TAGGCGAATA TTTCAGAGTC
AATAAGAAGC ACGGTTCTAA AGACCGACGC GTGATCCGTG AGAGTCTGTT TGCCATGTTC
CGTTGGTGGG GCTGGTTAAA CAAATTCAGC GATGCTCAGT CGAGTCAAGC CTGGTTCTCT
ATGCTCACCG CAACCGCGAC CATGGAATCA CACGCCTGGC ATGACATAAT TCAAGCCTGG
GGAGAGTTTT CAGGTATCGA CTTTTCTGGC TCTAGCTATA ACCAGGATGC GCCATCGACT
GCATTCCCTT GCGTGAGCAG CAAGTGTGAG TGGATGAATG CACAATTTGC CCCACTGACA
TTTGATACCG ATGAGCTGGT ACCGGGGTGG TTCTGGCAGG TTTGTCCGAT CGAAGATGCG
GCGCAGCGAT TGGCTATGGT CGAGTCTCTG TCATCACGCC CTCCTATCTG GAGCCGCGCT
CAGAATATCG ATACAACTAC CGCCATTGAG CAGCTCAATC TGGTCGATGT TCCGGCAACA
GCCAGTGACT ATTTCAGTGA CACGATTAAC TTAGGCCATA AGAGCATTAA CTTGAATGGC
TTATCTCTGT ATAAAGAGGG CAAGCTGGAG ATACAGGATC TTGGCTCTCA GGTGATTGGC
CATATCTGTG CCCCCAAAGA GAATGACCTT TGGTGGGACA CCTGTAGCGG CGCCGGAGGG
AAAAGCCTAC AGCTCAGATC TCTGATGCTT CAGCAGAGCT CTCAATCCAC TGGTAGTATC
ATAGCATCCG ATATACGTCG CAAACCCTTA GAGGAGTTAG CCAAGCGAGC TAAGCGAGCC
GGCTTTAAGG GGATCACTGT TTCCCCGTGG AAATCCGATG AGCTGCCGGT ACCTCACGCC
CATTTCGATG GCGTGCTCGT CGATGCGCCT TGCAGCTGCA CCGGCACCTG GCGTCGAAAT
CCGGATATGC GCTGGATAGA TGCCGTGGAA GTGGTACAAG ACAAACCTGA GTTGCAACTC
GATATTCTGC GCAGAAGCAG TCAGGCAGTT AAACGTGGCG GCACTTTAGT CTATGCCACC
TGCTCACTCT CTCCCGTTGA GAATGAAGAG GTGGTTAATG CCTTTTTAGC CGAACAGAGT
GAATTCACCT TAGAGTCAAT CACTCACCCG TTCACCGGCA ACGAAACAGA GATGCTAACC
GTATTCCCGT TCGAAGCCGA TACAGACGGT ATGTTTGTGG CACGAATGAG ACGAAGCTAA
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| Protein sequence | MNSSQSNSTP KDLLSITDVQ AETTSQKRAL SYANTIYLLF HQVMDKQQPA DRVVGEYFRV
NKKHGSKDRR VIRESLFAMF RWWGWLNKFS DAQSSQAWFS MLTATATMES HAWHDIIQAW
GEFSGIDFSG SSYNQDAPST AFPCVSSKCE WMNAQFAPLT FDTDELVPGW FWQVCPIEDA
AQRLAMVESL SSRPPIWSRA QNIDTTTAIE QLNLVDVPAT ASDYFSDTIN LGHKSINLNG
LSLYKEGKLE IQDLGSQVIG HICAPKENDL WWDTCSGAGG KSLQLRSLML QQSSQSTGSI
IASDIRRKPL EELAKRAKRA GFKGITVSPW KSDELPVPHA HFDGVLVDAP CSCTGTWRRN
PDMRWIDAVE VVQDKPELQL DILRRSSQAV KRGGTLVYAT CSLSPVENEE VVNAFLAEQS
EFTLESITHP FTGNETEMLT VFPFEADTDG MFVARMRRS
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