| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3207 |
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| Symbol | |
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| ID | 5612738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3885693 |
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| End bp | 3887117 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934145 |
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| Product | divalent anion:sodium symporter family protein |
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| Protein accession | YP_001474939 |
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| Protein GI | 157376339 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | [TIGR00785] anion transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAAT ACTTGAAGTA CATAATCCCC ATTCTTATCC CTCTGATTGT TTTATCCCTT
CCGACCCATT TTTTTCCTTT TGATGGTTTA ACGATCATAC AACAACGAGT GATTGCAATA
TTTCTATTGG CGGCACTGTG TTGGGTGATG GAGCCGATTC CAATTTATGC TACATCCGTG
GTGATTATCG TATTAGAGTT ATTGCTGTTG TCCGATAAAA GCTTCATTCT TTTTCGCTTA
GGGTCAGATC AAAGTAACTT TGGCGAACTG TTAAAATACA ACGAGATAAT GGCGACCTTT
GCAAGTCCAA TCATTATGCT GTTTCTTGGT GGTTTCTTCT TAGCGATGGC GGCAACCAAA
TATCGTTTGG ATATCAACTT GGCCAGGGTG TTATTAAAGC CCTTTGGCAG TGAACCTCGT
TTTGTGATGC TAGGTTTAAT GCTGATCACC GGAATCTTTT CGATGTTCAT GTCCAACACC
GCTACCACAG CGATGATGTT GTCGATTTTA ACCCCGGTAA TCGCGCTGTT TGGTCCGAAA
GATCCCGGTA AAATTGCGTT CGCATTATGC ATTCCTGTTG CGGCCAATAT TGGTGGTATC
GGCACCCCAA TCGGAACCCC TCCTAATGCT ATTGCCCTTA AATATTTAGT GGACGATAAC
CTCATTACCT TTGGTGAATG GATGATGTTT GGTGTGCCAT TTGTGGTGGT GATGATGACC
GCTTCCTGGT TCCTGATTAA CCATCTTTTT CCCGCTAAGC AAGAGAAGAT AGAGCTTAAA
ATAAAAGGGA AATTTTTAAA AACGCCAAAA GCGATTACCG TTTACATCAC CTTCATTATG
ACCATCGGAT TATGGTTGAT GGGGTCTCGT CATGGCATGA ACTCTTACAC CGTTGCTTTG
ATCCCTGTGG CTATTTTCTC TTTAACCGGC ATTATCAATA AAGAGGATCT TAAGAAGATC
TCTTGGGATG TTTTATGGCT GGTTTCGGGT GGTATCGCAT TAGGGCTCGC GCTCGATAAA
ACAGGACTGG CACGCTTGAT GGTGCACAGT ATCCCATTTG ATGCCTTCTC ACCATATGTG
GTATTGCTAG GGGCGGCGAT GCTATGTTTG ATTATGGCTA ACTTTATGTC ACATACGGCA
ACCGCGAACC TGTTAATGCC AATTATGGCG GCTTTAGGCA CGTCGATGAC ATCATTAACG
CCGCTCGGAG GTGAGATAAC ATTGATTTTA GTTGTTACCT TCGCCGCTTC GCTCGGTATG
TCGTTGCCAA TTAGTACGCC ACCGAATGCA TTGGCACATG CAACAGGCCA CGTTCAGACT
AACCAGATGG CAAAAATTGG GATAATTCTT GGCGTATTAG GTGTCTCACT GAGCTTTGTG
ATGGTGTGGA TCTTGAACAT CACGGGCTTT ATTGGACAGC CCTGA
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| Protein sequence | MRQYLKYIIP ILIPLIVLSL PTHFFPFDGL TIIQQRVIAI FLLAALCWVM EPIPIYATSV
VIIVLELLLL SDKSFILFRL GSDQSNFGEL LKYNEIMATF ASPIIMLFLG GFFLAMAATK
YRLDINLARV LLKPFGSEPR FVMLGLMLIT GIFSMFMSNT ATTAMMLSIL TPVIALFGPK
DPGKIAFALC IPVAANIGGI GTPIGTPPNA IALKYLVDDN LITFGEWMMF GVPFVVVMMT
ASWFLINHLF PAKQEKIELK IKGKFLKTPK AITVYITFIM TIGLWLMGSR HGMNSYTVAL
IPVAIFSLTG IINKEDLKKI SWDVLWLVSG GIALGLALDK TGLARLMVHS IPFDAFSPYV
VLLGAAMLCL IMANFMSHTA TANLLMPIMA ALGTSMTSLT PLGGEITLIL VVTFAASLGM
SLPISTPPNA LAHATGHVQT NQMAKIGIIL GVLGVSLSFV MVWILNITGF IGQP
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