| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3200 |
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| Symbol | |
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| ID | 5612727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3862123 |
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| End bp | 3864171 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934138 |
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| Product | elongation factor G |
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| Protein accession | YP_001474932 |
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| Protein GI | 157376332 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGT TTATAACCGA GCAGATCAGA AATCTGGCGG TGCTCGGACA CACAGGATCG
GGTAAATCCT CTCTACTGGA GGCATTACTC TTCCGCGCTA AGGCTATTGC TCAAAAAGGC
AGGGTGGATA AGGGCACAAA TCATGCTGAT TTCACTGCCC AGGAAAAATC CCATCGCCAC
AGTTTAGAAC CCTCCTTCTT AAATCTAGAT TTCGACAACC ACCATATCAA CCTTATCGAC
ACCCCCGGCA TGCCAGACTT CTTTGGCCGA GCACTATTAC CCCTGCCCGG CGTTGAGTCT
GTCCTGTTGG TGATCAATGC ATCGACCGGT ATCGAGACGC TGACTCAAAG AGCATTCGAA
GCGGCTCGAA CCATGGGTAA GGTGGTATTG ATTGCGATTA ACCACATCGA TGGTAATGAA
GAGAGGTTAC CGGGCCTCCT CGAAGAGATT CAGCGGCGAT TCGGACCTCG TTGTCTGCCG
GTCAATTTAC CGACAGCATC ATTAGATGAT GTGGTCGATT GTTATCTTCA TTGTGAAGAG
GGCGCCGCCG ATTCACTGTT TCACTCTGCG ATGTCGGCTA AAGATGATCT AATCGATACG
GTACTCGAAG AAGATGAGGA GTTGATGGAG GTCTATCTCG AACAGGGAGA GTGTTTATCC
CCAGAGCAGT TACATGCGCC ATTGGAAGCC GCGCTACGTA TGGGGCATCT GGTGCCTGTG
TGTTTCACCA GTGCAGAGCA AGAGGTCGGT ATTGGATCAC TGCTCGAGAT CATCACTAAG
TTGATGCCAA GTCCATTAGA GGCTAACCCG CCTCAGTTTG TGAAAGGGGC TGGGAGCAAT
CTTACACCGG TGGATGTGAC TCAGAATGCC AGTGACCATG TACTCGCCCA TGTATTTAGG
ATCTCCATCG ATCCCTTCTT CGGACGAATG GGCGTGTTCC GCCTCTATCA GGGTACGGTC
ACCGTTGGTA TGAAGCTGTT TATTGGTGAG GGACGTAAAC CGTTTAAAGT TACCCATATA
TTTAAGTTAC AAGGTGATAA GCAAATTGGG GTACCGCAAG CAGTTCCTGG TGATATCTGT
GCGGTGGCCA AAGTGGATGA ACTTGAAGTC GGCGCCGTAT TACACGACAG TCATGATGAA
GATCAATTTC ATCTCCCTGA GCTCAATCTT CCTCAACCTA TCTTCGGTTT AGCCGTGATG
CCCAAGCGTC GAGGCGATGA ACAAAAGATT GCCGAAGTTT TACATAAGTT GGTTGCCGAA
GATCCAAGCT TAAGTCTGGC GAAGAATGAT GCTGAAGGTC AAATGATACT TCAGGGGCAG
GGGGACCTGC ATCTTCAGAT CGCGATAGAA AAAGCCCATG ACGTGTTTAA TGTCGATATG
GATACAGATA AACCCGCTGT CGCATATCGT GAGACGATTA CCGACAGTGC TACAGCAAGG
TACCGCCACA AGAAGCAATC GGGTGGCTCT GGTCAGTTTG GTGAAGTCGA GCTGACGGTA
GAGCCTCTGG AAAGGGGCGC CGGTTTTGAG TTTGTCTCTA AGGTCGTGGG GGGATCGGTT
CCCGGGCAGT ATATTCCCGC CGTTGAAAAA GGGATAAAAG AAGCCATGAT TTCAGGCGCC
TTAGCCGGGT TCCCTATGCA GGATATCAAA GTCTGTTTAC TCGATGGTAA GCATCATAGT
GTCGACTCGA AAGAGATAGC CTTTGTGATG GCGGGTAAGA AGGCGTTTCT CGATGCGGTT
GCCCAGGCAA CGCCGGTGAT ATTAGAACCC GTCGTTGAGA TGGAAGTGGT TGTCGCACAG
GAACACGTGG GCGATATCAC AGGTGATATC AGTTCCTGTC GAGGCATGGT ATGTGGTACT
CAGGCTCAGG GGAATAGTAA AGTCGTTGTC AGCGTAGAGG CGCCGCTTGC GACTGTCGAT
GACTATTCGA CCCGACTTAA ATCTATGACC GGAGGGGACG GTCAGTTCAG CATGACCTTT
GCCAGATACG ATATTACTCC GGACAATGTA CAGAAATCAT TAATCAAATC GGTAAGAGAG
GTCGCCTGA
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| Protein sequence | MAEFITEQIR NLAVLGHTGS GKSSLLEALL FRAKAIAQKG RVDKGTNHAD FTAQEKSHRH
SLEPSFLNLD FDNHHINLID TPGMPDFFGR ALLPLPGVES VLLVINASTG IETLTQRAFE
AARTMGKVVL IAINHIDGNE ERLPGLLEEI QRRFGPRCLP VNLPTASLDD VVDCYLHCEE
GAADSLFHSA MSAKDDLIDT VLEEDEELME VYLEQGECLS PEQLHAPLEA ALRMGHLVPV
CFTSAEQEVG IGSLLEIITK LMPSPLEANP PQFVKGAGSN LTPVDVTQNA SDHVLAHVFR
ISIDPFFGRM GVFRLYQGTV TVGMKLFIGE GRKPFKVTHI FKLQGDKQIG VPQAVPGDIC
AVAKVDELEV GAVLHDSHDE DQFHLPELNL PQPIFGLAVM PKRRGDEQKI AEVLHKLVAE
DPSLSLAKND AEGQMILQGQ GDLHLQIAIE KAHDVFNVDM DTDKPAVAYR ETITDSATAR
YRHKKQSGGS GQFGEVELTV EPLERGAGFE FVSKVVGGSV PGQYIPAVEK GIKEAMISGA
LAGFPMQDIK VCLLDGKHHS VDSKEIAFVM AGKKAFLDAV AQATPVILEP VVEMEVVVAQ
EHVGDITGDI SSCRGMVCGT QAQGNSKVVV SVEAPLATVD DYSTRLKSMT GGDGQFSMTF
ARYDITPDNV QKSLIKSVRE VA
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