| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3194 |
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| Symbol | |
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| ID | 5611995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3852294 |
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| End bp | 3853589 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934132 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474926 |
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| Protein GI | 157376326 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTG TTTGGGGTTG TTGTTTATCT CTTATAGTGG CATTAGCCGC TACACAGAGC
CGAGCCGCTC CCATTCCCGG CCTCGAGCCC GCCTCGAACT GGGATCTCGA TGGTTATGTG
AAATATATGG GCACAGGCAC CTTTCCCGAT ACCAGCGCGG ATCTTAGCGA TCACCTGCTG
CATCAAAGAT TCAACTTTGA ATATCGATTC GACAGTTCGT TAAGAATCAA TATCGGCATG
AGGAATAGAG TCTTCTACGG GGATACCTCG AAAACGCCGG GTTATGGAGA TTTAATCGAG
TTTGACCCGG GGTATTGGGA GATGTCATCG ACCTGGATGG ACAGGGATGG CTGGGTCGGC
AATAGTCAGT TTGATCGTGC ATATGTTAAT TGGTCGCCAG GGGATGATTG GCAGCTGAGG
GTGGGGCGTT TTCGCATCAA TTGGGCCATG ACAACCTTGT GGAACCCCAA TGATATTTTT
AATGCCTACT CGATTTACGA CTTCGATTAT GAGGAACGTG CCGGCGCAGA TGCGGTGCTG
ATTAGTCGAA AACTGGGTTT TGCCAGTTCA CTCAATCTTG TATATAACCC CAATCAGGAC
AGCGACCTCA ATAGCTTTGC GGCGCGATAC CTGTTTAATT CAGATGGTTG GGATATGCAG
TTATTACTGG GTAAATCCGG CTTCGACCGC ATCTTAGGGG CAGGCTTTGC GGGTGATATA
TCCGGTGCGG GCTTTCGTGG GGAGTTTACC TATTTCGATC CTATCTATGA TCATTGGCCA
AGATTGCCTG AAGTTGAAAG TGGTATAAAT AGGCTGCCAT CTAATATCTC CGACAGGGGG
GGACTTTTCA GGCCGATCTC TATATCCCCT TCTCTGTCAG CGCTCTCTCC TGATGAGTTG
GAGGCGACCA GTGTTTCGAC ACTCGAGGCC GATTACAGTT TTATCGGCAG GCGTAATTGG
TTGATCAGAG GTTCGGTCCT GCATATATCA AATCCGACTG AGTCAGATAG CGCCTTGCTT
TACCTTAATC TGCCGTTGAC GGCCAGAACC TTGAGCTTTA CCGATTGGAC CTACTATTTC
GATCTGGGTT TCGATATCTC ATCCCTCAGC CGATTAACCT TGACGACCAG CTATTACCAG
GATGGCTCCT ATTTTATCGG GGCAAACGGC AGTTACTCTC TGGCCGATGA CTGGCAACTA
TTAATGGTAC TGCAACGCTT CGACGGCAGT AGCGATAGCC TGTTTGGCAA AACGGCTGCG
ACACTTGGAT TTGTACAGCT TAAGTGGAGC TTTTAG
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| Protein sequence | MKPVWGCCLS LIVALAATQS RAAPIPGLEP ASNWDLDGYV KYMGTGTFPD TSADLSDHLL
HQRFNFEYRF DSSLRINIGM RNRVFYGDTS KTPGYGDLIE FDPGYWEMSS TWMDRDGWVG
NSQFDRAYVN WSPGDDWQLR VGRFRINWAM TTLWNPNDIF NAYSIYDFDY EERAGADAVL
ISRKLGFASS LNLVYNPNQD SDLNSFAARY LFNSDGWDMQ LLLGKSGFDR ILGAGFAGDI
SGAGFRGEFT YFDPIYDHWP RLPEVESGIN RLPSNISDRG GLFRPISISP SLSALSPDEL
EATSVSTLEA DYSFIGRRNW LIRGSVLHIS NPTESDSALL YLNLPLTART LSFTDWTYYF
DLGFDISSLS RLTLTTSYYQ DGSYFIGANG SYSLADDWQL LMVLQRFDGS SDSLFGKTAA
TLGFVQLKWS F
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