| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3185 |
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| Symbol | |
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| ID | 5611885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3842878 |
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| End bp | 3844068 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934123 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474917 |
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| Protein GI | 157376317 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.624784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC GTGCACTTAC CCTAGCAATT TTAGCTGGTT TAGCTTCTTC CGCTGTCGCA
GCAGACACTG TCGACCCACT AAAGAAAGCA TTTATTGATG ATTCTGAAGT AAAAGTTCAA
TTCCGTTTAC GTTTCGAACA GGCTGATGTC GATACTGTTG ATAAACAAGA TCAAACAACC
ATCCGTACTC GCTTAAATTA CAAGACAGGT GATATCTATA ACTTCTTCGC GCTAGCAGAA
GTTGACGATG TTCGCTCAAC CGATAATGAG CCACTCATTG CCGATTATGA GTACACGCAA
ATTAACCAAG CCTTCATTGG TTATAAGGCG CCTGCAGAAA CACTATTGAA ATATGGTCGT
CAGCGTATCC TGCTGGACAA CCAACGTTTC GTTGGTGGTG TAGGCTTCCG TCAGAATGAA
CAAACTTACG ATGCATTTTC GGTAAAAAAT ACAGCGATTG AAAATTTAAC GGCTTACTAC
TCATATGTGA ATAATGTAAA CCGTATCTTC CCTGAAGGTT CAGGAAAAGA GTCGCACACA
AACGAAACAA GCCTACTCAA CCTGAACTAT AAAGCGGGTG ATATTGCCAA TATCACAGGT
TACGCATACC TGATTGATAA CAGCAACGTT GCTGCTTTCT CTACCGATAC CTATGGTGTT
CGTGCAACAG GCAAACTAAA GCTGGACGCA ATTAAGCTTA GCTATGAAGC TGAATATGCC
CAACAATCTG AAGGTGGCGA TAACCCGACT AAATATACAG CAGACTACTA CAAGTTAGGC
GCTGGAATTG GTTTCGGTGC ATTCGGCGCT AAAGTTGGCT ACGAAGTTCT GGGATCTGAT
GACGGCGCAG CCGGCTTTAT CACTCCGCTG GCAACCCTGC ATGCCTTCAA CGGTTGGACC
GATAAGTTCC TATTCGGCGG CAAGGGTAAC TGGGAAAATG GTATTGTAGA TACGCATGTT
ATCTTAACTG CAAAACTTGC AGGCCTTAAG TTACTGGCAA AATACCACAA GTTCGAATCT
GACTACGGCG ACATCGACAT GGGTAAAGAG TGGGGCGTTG CCGCAACATA CCCATTCGCT
AAGCACTACA GTGTTGGTGT TAAGTATGCC AGCTTTAGCG GCGCCGATGC CGGTTATGGT
TTCTCGAATG ATACCGATAA GCTATGGCTA ACGCTTCAAG CTAAGTACTA A
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| Protein sequence | MKVRALTLAI LAGLASSAVA ADTVDPLKKA FIDDSEVKVQ FRLRFEQADV DTVDKQDQTT
IRTRLNYKTG DIYNFFALAE VDDVRSTDNE PLIADYEYTQ INQAFIGYKA PAETLLKYGR
QRILLDNQRF VGGVGFRQNE QTYDAFSVKN TAIENLTAYY SYVNNVNRIF PEGSGKESHT
NETSLLNLNY KAGDIANITG YAYLIDNSNV AAFSTDTYGV RATGKLKLDA IKLSYEAEYA
QQSEGGDNPT KYTADYYKLG AGIGFGAFGA KVGYEVLGSD DGAAGFITPL ATLHAFNGWT
DKFLFGGKGN WENGIVDTHV ILTAKLAGLK LLAKYHKFES DYGDIDMGKE WGVAATYPFA
KHYSVGVKYA SFSGADAGYG FSNDTDKLWL TLQAKY
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