| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3184 |
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| Symbol | |
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| ID | 5611559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3840370 |
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| End bp | 3842370 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934122 |
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| Product | metallo-beta-lactamase superfamily protein |
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| Protein accession | YP_001474916 |
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| Protein GI | 157376316 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.326866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATT CAATACTTGC AGTATCTATT ATCAGTGCAT TGTCACTTAA TGCGTTTAGC
CTTAATGCCT TTGCCGCGCA ACACGAACAT GATCACATCA GCGTAAGCTA TGAAGGTAAA
GATGCAACCC TGCACACAGC CAACGCCAAC AAGGCAACGG CGAAGACGCT GAACTTCGCC
GACAGGGCAG CATTTGAGCA GTCTTCGAAG AACTTGATCG CCGAGCTTGA TGAGAAAACA
GCAGCCATCA TGCGTTCTGA GTTCGAATAC CTCACCGATA AGGCACCGGA TTCGATCAAC
CCGTCTTTAC ACCGTCAGGC ACAACTCAAT ATGGTTGCAA ATGGCCTGTA CAAGGTCCGT
GACGGCATCT ATCAGGTGCG CGGTACCGAT CTGTCAAATT TGACCTTGAT CCGCAGCGAT
AACGGCTGGA TAGCCTACGA TGTATTGCTG ACAAAGGAAG CGGCGAAGTT GTCACTTGAG
TTTGCCATGA AAAACCTTCC CAAAGACGGC GACCTCCCCG TTGTTGCGAT GATCTATTCA
CACAGCCATG CCGATCACTT CGGCGGCGCT CGTGGCGTGC AGGAGATCTA TCCTAATGTC
AAAGTGTATG GCTCAGACAA CATCACAAAA GAGATTGTCG ATGAAAACGT GTTAGCCGGC
AACGCCATGA GTCGACGAGC CGCCTATCAA TATGGTGCAA CATTGGGTAA GCATGACCAC
GGCATCGTCG ATGCTGCACT TGGTAAGGGA ATATCGAAAG GTGAGATCAC CTACGTTAAA
CCCGACTACA CGCTCAATGG CGACGGAAAA TGGGAAACAC TGACCATTGA TGGCCTGGAG
ATGATCTTTA TGGATGCCTC CGGCACCGAA GCAGCATCTG AGATGATCAC CTACATTCCT
TCGATGAAGG CGCTATGGAC AGCAGAGCTC ACTTATCAGG GCATGCACAA CGTCTATACC
CTACGCGGGG CTAAAGTCCG TGACTCCCAG AAATGGTCAA AAGATATCAA TGAGATGATC
AACGCCTTCG GCGGTGAAGT ACAGACTCTG TTTGCCTCTC ACTCGGCACC GATTTGGGGA
AATAAAGAGA TCAATGATTT CCTCAGGCTG CAACGTGACA ACTATGGTTT CGTACATAAT
CAAACCCTTC GACTGGCCAA TCAGGGAGTG ACGATTCAAG ACATTGGTGA TGCGATCCAA
GAGGTTATCC CTGAGTCAAT CTTCAAGGCC TGGCATACCA ATGGCTACCA CGGCACATAC
AGCCATAACG CTAAAGCTGT GTACAACATG TACCTGGGCT ATTTTGACAT GAACCCGGCT
AACCTGAATC CGCTGCCGAC TCAGCCTGAA GCAATGAAAT TTGTCGAGTA TATGGGTGGT
GCCGAAACCG TCATGACTAA AGCCCAGGTC GATTTTGCTC AGGGGGAATA TCGTTTCGTT
GCCACAGCAC TCAATAAGGT AGTGATGGCC GATCCGGGTA ATCACAGTGC CCGTCAACTC
CTTGCCGATA CCTATGAGCA GTTAGGGTAT CAAGCCGAGG GAGCGGGTTG GAGAAACATC
TATCTGACTG GCGCTCAAGA GCTAAGAGCC GGCATTCAAC CGGGCACACC TAAAACAGCT
TCAGCCGATG TCATCAGCGA GATGGATCTG CCGACCCTGT TCGACTTTTT GGCCGTGAAA
GTCGATAGCA TGAAAGCTGC CGAACTAGGG CTAATCACGA TGAACATAAT CACTCCGGAC
AATAGTAAAA TACTCTATGT CGAGATGAGT AACGGCAACC TGAGCAATAT CGAGGTGAGT
AAAGCCAAGC AAGCGGATGC CACGCTAACG GTGAATCAAG CCGATATCAC TCACATACTA
TTAGGAAAAG CGAAGATAAA GGAACTCATA GCTCAAGGTA AGGCGACGAT GTCAGGTGAC
AGTGAGGCGT TCAACAAAAT AGCGTCAACC TTAGTCGAGT TTGACAGCGA ATTTGAAATA
GTCCCTCTGA GCACTCACTA A
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| Protein sequence | MKNSILAVSI ISALSLNAFS LNAFAAQHEH DHISVSYEGK DATLHTANAN KATAKTLNFA
DRAAFEQSSK NLIAELDEKT AAIMRSEFEY LTDKAPDSIN PSLHRQAQLN MVANGLYKVR
DGIYQVRGTD LSNLTLIRSD NGWIAYDVLL TKEAAKLSLE FAMKNLPKDG DLPVVAMIYS
HSHADHFGGA RGVQEIYPNV KVYGSDNITK EIVDENVLAG NAMSRRAAYQ YGATLGKHDH
GIVDAALGKG ISKGEITYVK PDYTLNGDGK WETLTIDGLE MIFMDASGTE AASEMITYIP
SMKALWTAEL TYQGMHNVYT LRGAKVRDSQ KWSKDINEMI NAFGGEVQTL FASHSAPIWG
NKEINDFLRL QRDNYGFVHN QTLRLANQGV TIQDIGDAIQ EVIPESIFKA WHTNGYHGTY
SHNAKAVYNM YLGYFDMNPA NLNPLPTQPE AMKFVEYMGG AETVMTKAQV DFAQGEYRFV
ATALNKVVMA DPGNHSARQL LADTYEQLGY QAEGAGWRNI YLTGAQELRA GIQPGTPKTA
SADVISEMDL PTLFDFLAVK VDSMKAAELG LITMNIITPD NSKILYVEMS NGNLSNIEVS
KAKQADATLT VNQADITHIL LGKAKIKELI AQGKATMSGD SEAFNKIAST LVEFDSEFEI
VPLSTH
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