| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3129 |
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| Symbol | |
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| ID | 5611247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3775631 |
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| End bp | 3776236 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934067 |
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| Product | methyltransferase type 11 |
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| Protein accession | YP_001474861 |
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| Protein GI | 157376261 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0588283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA TCCCAGGTAC AAAAGGTTAC GGTAGATTTG TTAGTTGTTT TATCGAAAGT
AGCCAGTCAT TAAGCTTCAA TGAAGCCTGC AAAGACTTCA TTGACTTTTT GCCTCCCATC
TCTGGGCTAG TTCTGGATGT AGGCGCGGGC GCAGGTCAAA ATTCTGCAGC ACTAGCAGAG
TTAGGCTATT CGGTCGTGGC AGTTGAGCCA ATGACTGAGT TTTTGGACGC TGCGCGTATT
AAATATTCAG TTCTCCCAAT AACATGGCTA AATGGTAGTT TGCCAATGAT AGAGTGCCTG
AGATCTGATC AAAGTAAATT TGATTTAATT CTCGTCATTG GAGTTTGGCA TCATCTTAAT
GAAGCTGAGG GAGCACTGGC AATGAAACGG TTTGCATCTC TTCTGAACAG TGGTGGAATA
TGTGCTTTTT CACTTCGGAA TGGTCCTCCC GGTATGGGGA CGCACGTGTA CCAAACAGAT
GCGAACCATA CCGTAAAGCA AGCCAAAAAG TTGGGGTTGG AGTGTATCTT CATGTTGGAA
GATCAGCCAA GCATCCTCAA GAACAAAGAC GACGTAAAGT GGGCGCGTCT AGTGTCTCAG
AAGTAG
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| Protein sequence | MSEIPGTKGY GRFVSCFIES SQSLSFNEAC KDFIDFLPPI SGLVLDVGAG AGQNSAALAE
LGYSVVAVEP MTEFLDAARI KYSVLPITWL NGSLPMIECL RSDQSKFDLI LVIGVWHHLN
EAEGALAMKR FASLLNSGGI CAFSLRNGPP GMGTHVYQTD ANHTVKQAKK LGLECIFMLE
DQPSILKNKD DVKWARLVSQ K
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