| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3005 |
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| Symbol | |
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| ID | 5610406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3636931 |
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| End bp | 3637755 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640933942 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474737 |
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| Protein GI | 157376137 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0326681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA TCTACCTTCA TGTGGGCTAC CATAAAACAG GTACTACGGC TATCCAGAAT
TTCATGCATC GCAATAAGGA TTTGATTTTG TCAGAAGGAA TATTATATCC TTTAACAGGA
CTATCTGGTG CAGGCCATAG TAAGCTTGCT AATGCCTTCA AAGGGAATGA ATGGGATAAG
GTTCTGAAGT CTCTTCTACC AAAAGAAAAT GAAATTAGAC AGAATATCTA CGCGCTTGAA
AGAGGGGAGA GCTCAGCGTC TCTATATATG GCTCTAAAAA GTGAAGTTGC TAAATCAGAA
GTCAAAAAAA TTGTATTGAG TAGCGAGTGC TTCCTTGAGT GGATTGATCC TCAAGAGGTT
AAAGAAGCAT TAGCTGGTAT AAATGCAAGT ATAAAAATTA TCTTCTACTT TAGGGAGCCA
AAGCAATGGA TAGAAGCTGT TTATTACCAG TTGATTAAAG ATAGATACTT TAGGTACTCT
GGAGAAATTG AAGATTTACC ACAGTGGGAA ATGTTAAACT ATAATGCCGT TTTGCAAGAC
TGGGCTCTGG TTTTTGGTCG AAATAATTTA ATTGTCCGTC AATACGAAAA TACTACTTGT
CTAGAGCACG GTGTAATTAC AGACTTTCTA AATATCATTG GACTTTCAGA AGTAAATAAT
TTCCAGTACC CTACAGCCGT GTCAGATGTA AACTTAGGTC TGCATCCCTT ACTTATAAAA
TTATTAAAAC ATACAAACAA GCTGAATTTT TCGGAAAAAT TTCACAAAAG GGTTTTAAAA
TTTCTTTACC CCATTTCTAA TTGGTTAATA AAAGTTAGAA GTTAG
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| Protein sequence | MKEIYLHVGY HKTGTTAIQN FMHRNKDLIL SEGILYPLTG LSGAGHSKLA NAFKGNEWDK
VLKSLLPKEN EIRQNIYALE RGESSASLYM ALKSEVAKSE VKKIVLSSEC FLEWIDPQEV
KEALAGINAS IKIIFYFREP KQWIEAVYYQ LIKDRYFRYS GEIEDLPQWE MLNYNAVLQD
WALVFGRNNL IVRQYENTTC LEHGVITDFL NIIGLSEVNN FQYPTAVSDV NLGLHPLLIK
LLKHTNKLNF SEKFHKRVLK FLYPISNWLI KVRS
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