| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2919 |
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| Symbol | |
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| ID | 5609705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3533607 |
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| End bp | 3534572 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933859 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001474654 |
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| Protein GI | 157376054 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATC AAGCAATTAA GAAAATCAGT GAACTCGACG TATTTTGTTT ACAGGTATTT
AAAATCATTT TTCAAACCGG TCATGCGAAT GCAGCAGCAA AAGAGTTGAA GGTATCTGCG
CCTAAAATCA GTCGCTGCCT AAACATTTTA CGGGCGACGT TTGATGATCA GCTTTTCTAT
CGTCGTCAGT TTGGGTTGAA ACCAACGCCG TTAGCCGAGC ATCTTTTTGA GCCCATATGT
CGGTTTTGCT ACTCGGTGAC TAAAATCGAA CAAGTGGCGT TTGAAGTAAA CCATCGCGAC
TCAACTCCCA TTCTTAATAT CGCGGTGACG CCGGGCATCA TGGCGAGTCT CTCTCTGATT
TTATCCAATA ATTATTCTCT TAATCGCATT GGTAAGATTC GGCTCCACCC TTGGAGTGAT
GACTCAGCCG AGTTAATTCA CAGTGGAAAG TTAGACTTAG GGGTGGCCTT AGATACCTCT
TGTCACCATG ATCTGAATTT TGAACATTTA GGTACTTTAG ACTCCGTTTA TCTGGCCGGA
AATGTGAGAC ATCCCATTTG GGCGAGGCTT CCTCACTTTA CCTTAAATGA GATTTGTAAA
TACCCCTTTC TTTATCTGGA ATGTAAGGGG GTCAATGACA AGATGGCCCC TCTGGAGGTC
TATAGCCACC AATCGGGAAT AAAGCCTGTC AGTGTTGAAA AGGTTACAGG TAAAGAGCAG
TGGTACAGCA ACTTACTGAC CATGAGTAGT TTGGCATTTA CTCCAGCGGT AGAGGCTGAA
ATTTATAAAA ATATGCCCGG GATCCATGTC GAGCGATTAC CCGAAGTTGA GGTAAATAAG
CTTCATGGTA ATGTGCTACC CCCAAAATAC TATTTGATTG AAAAACCAGT TTCTCATCGC
CGATACACAG TTGAAAACAG GAGGGTAATA ATCAATACCA TTAAAGAGCT ACTGGCTTCT
TCATGA
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| Protein sequence | MTNQAIKKIS ELDVFCLQVF KIIFQTGHAN AAAKELKVSA PKISRCLNIL RATFDDQLFY
RRQFGLKPTP LAEHLFEPIC RFCYSVTKIE QVAFEVNHRD STPILNIAVT PGIMASLSLI
LSNNYSLNRI GKIRLHPWSD DSAELIHSGK LDLGVALDTS CHHDLNFEHL GTLDSVYLAG
NVRHPIWARL PHFTLNEICK YPFLYLECKG VNDKMAPLEV YSHQSGIKPV SVEKVTGKEQ
WYSNLLTMSS LAFTPAVEAE IYKNMPGIHV ERLPEVEVNK LHGNVLPPKY YLIEKPVSHR
RYTVENRRVI INTIKELLAS S
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