| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2867 |
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| Symbol | hscA |
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| ID | 5610581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3473673 |
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| End bp | 3475535 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933786 |
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| Product | chaperone protein HscA |
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| Protein accession | YP_001474602 |
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| Protein GI | 157376002 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000418416 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCTTT TGCAAATTGC TGAACCTGGA CAGACTGCAG CGCCTCATCA ACATAGATTG
GCTGTAGGTA TTGATTTAGG TACCACAAAC TCACTGGTTG CTGCCGTTCG CAGCGGTGTC
GCTGATACCC TGCCAGATGA GAATGCTCGA CATTCACTGC CATCGATAGT TCGTTATACC
GATACTGGCA TCGAAGCCGG TTTTGAGGCC GAGGCGCATT CTGCTAAAGA CCCACAAAAT
ACTATTGTAT CAGTGAAGCG TTTTATGGGC CGAAGTCTTG CTGATATTCA ATCGGGTATA
CAAGATCTGC CTTATCGTTT CCAAGCCAGT GAAAATGGTC TACCTTTGTT CGCTACCGAG
CAGGGCACAG TTAATCCCGT TCAAATCTCT TCAGAAATTC TAAAGCCGTT GATTTCCAGA
GCCGAAAGCA CACTAGGTGG CGATCTTGAA GGTATTGTCA TCACGGTTCC CGCTTATTTC
GATGATGCTC AACGTCAAGG AACTAAAGAT GCTGCAGCCC TGCTAGGGGT GAAAGTATTA
CGTTTATTAA ATGAACCTAC TGCAGCCGCA ATCGCATATG GATTAGATTC AGGGCAAGAG
GGCGTCATTG CTATCTATGA TCTTGGTGGC GGTACCTTCG ATATTTCAAT ATTGAGGCTC
AATAAAGGGG TGTTTGAAGT GTTAGCTACC GGTGGTGATT CTGCACTGGG TGGTGATGAC
TTTGATCATC TTCTTCATCA TCATCTTCTC CAGGAATGGC AGATAGATGC GCCTTCAGCA
TCGGTGAGTC GTCAGTTACT GATTGAATCC AGACGGGTGA AAGAAGTGTT GACCGATGAG
AGTGAAGTGA CTGCGACGCT GTTATTGGAC GATGGAACGA CACTTACTCA TGTCGTAACA
AAGTCACTGT TTGACTCTCT TATAACAAGC CTGGTTAAGA AGACTGTCGC AAGTTGTCGT
CGTGCCTTAC GTGATGCAGG TATCAAAGCG GATGAGGTAC TCGAAACTGT CTTGGTTGGT
GGCTCGACAA GAGTGCCATT GGTCAGAGAA CTGGTTGAAG GCTTCTTTGG CAAAGCGCCA
TTAACGTCTA TTGACCCGGA TAGGGTGGTG GCTATCGGTG CCGCAATTCA GGCTGATATT
TTAGTGGGTA ACAAGCCTGA ATCAGATCTC TTATTACTCG ATGTTCTCCC TCTGTCACTG
GGTATCGAAA CCATGGGAGG CTTAGTAGAA AAGGTCGTTT CACGTAACAC GACAATTCCC
GTGGCTAAAG CGCAAGAATT TACTACCTTT AAAGATGGTC AAACCGCTAT GGCATTTCAT
GTCGTACAGG GAGAGCGGGA ATTGGTCGAT GACTGCCGCT CGCTGGCGCG TTTTACTTTG
AAGGGGATCC CGCCATTGGC AGCGGGCGCT GCACATATTA GAGTCACCTT CCAGGTTGAT
GCCGATGGTT TATTGAGTGT GACTGCAATG GAGAAGTCTA CTGGCGTGCA GTCGAGCATA
CAGGTTAAGC CCTCTTTCGG CTTAACAGAT GAAGAGATCG GGTCCATGTT GAAAGATTCG
ATGGCGAACG CAAAAGATGA CATTGCTCGC CGTATGCTTG CAGAACAGCA AGTCGAAGCT
GCAAGGGTAC TCGAGACATT AAGTGCCGCA TTGGCGAAGG ATGGTGAGCT GTTAACGGCT
GACGAACGTA ATGCGATTGA GCAGAGCATG GCTGTATTGG TTGAAGTCGG TGGTCAGGAT
GATGCCGATG CGATTGAAAA AGCCATTGAA GCATTAGATG CTAGCACGCA GGATTTTGCG
GCTAAGCGTA TGGATAATTC AATTAAGCTG GCCCTTAAAG GCCAGTCAGT TGACAGTATT
TAG
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| Protein sequence | MALLQIAEPG QTAAPHQHRL AVGIDLGTTN SLVAAVRSGV ADTLPDENAR HSLPSIVRYT
DTGIEAGFEA EAHSAKDPQN TIVSVKRFMG RSLADIQSGI QDLPYRFQAS ENGLPLFATE
QGTVNPVQIS SEILKPLISR AESTLGGDLE GIVITVPAYF DDAQRQGTKD AAALLGVKVL
RLLNEPTAAA IAYGLDSGQE GVIAIYDLGG GTFDISILRL NKGVFEVLAT GGDSALGGDD
FDHLLHHHLL QEWQIDAPSA SVSRQLLIES RRVKEVLTDE SEVTATLLLD DGTTLTHVVT
KSLFDSLITS LVKKTVASCR RALRDAGIKA DEVLETVLVG GSTRVPLVRE LVEGFFGKAP
LTSIDPDRVV AIGAAIQADI LVGNKPESDL LLLDVLPLSL GIETMGGLVE KVVSRNTTIP
VAKAQEFTTF KDGQTAMAFH VVQGERELVD DCRSLARFTL KGIPPLAAGA AHIRVTFQVD
ADGLLSVTAM EKSTGVQSSI QVKPSFGLTD EEIGSMLKDS MANAKDDIAR RMLAEQQVEA
ARVLETLSAA LAKDGELLTA DERNAIEQSM AVLVEVGGQD DADAIEKAIE ALDASTQDFA
AKRMDNSIKL ALKGQSVDSI
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