| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2805 |
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| Symbol | |
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| ID | 5613640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3388466 |
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| End bp | 3388918 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933724 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474540 |
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| Protein GI | 157375940 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | [TIGR02826] anaerobic ribonucleoside-triphosphate reductase activating protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.495523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAACT CTTTACCTGC TCAAGTTGTC ATGCAAGAGG TTCCCGGTGA GATTTCGTTG
CTGTTTAGCA TTACCGGTTG TGATGTTGGC TGTAAAGGGT GCCACTCGAC AGAGCTTTGG
AATGAGGAGT ATGGCGAGCC GTTGAGTGAG GAATGTTACA GAGCCTATCT CAACCAATAT
CGCGGCTATG TCAGCTGTAT TTTGTTCTTC GGTGGAGAGT GGCAGCCGAA GCAGTTAAGT
GAGTATCTGG CACTCGCAAA AAAGATGGGG TTTAAAACCT GTCTATACAC AGGGCGAGAA
CGGGTCGAGC AGGAGATCCG CGCTCAACTG GATTTTCTCA AAACCGGTGA GTTCGACCAT
CAAGTTGGCG GACTCGATAG TCCCGGTACA AACCAGAAGT TTTACGATTT AGCTCAAAAT
AAAATAATTA ATTATAAATT CATTAACGAT TAA
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| Protein sequence | MFNSLPAQVV MQEVPGEISL LFSITGCDVG CKGCHSTELW NEEYGEPLSE ECYRAYLNQY
RGYVSCILFF GGEWQPKQLS EYLALAKKMG FKTCLYTGRE RVEQEIRAQL DFLKTGEFDH
QVGGLDSPGT NQKFYDLAQN KIINYKFIND
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