| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2786 |
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| Symbol | |
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| ID | 5612814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3359954 |
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| End bp | 3360394 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933705 |
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| Product | transcription activator, effector binding |
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| Protein accession | YP_001474521 |
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| Protein GI | 157375921 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3708] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGTA TTCACAAAAG CGCCCAGGGG CTATCAGGGC TCATCACCCG GACCAATAAT
GCCGCAGAAA CAGAAGCTGA AACCGCCAGA ATTGGCCCGT TATGGCAGCA GTACTTTGCC
GAGAATGACG GCCATTTAAC ACAAGGTAAA CCTATGTATG GCGTCTACCA TGATTATCAG
TCAGATATGA ATGGAGATTA TTCTGTGCTG GTTGGAACCC AGGCGGAATC GGATGATATA
TGTGATATCC GCTTAGCCGA AGGGGATTAT CTGAAGTTCA GCGGCAGTGG GAAAATGCCG
GATTGTGTGG TTGAGCAATG GACAGAGATC TGGCGATACT TCAGCTCACC CGAGTGTCGG
CATCAACGTA ATTATCTGAC CGATTATGAA GTTTACCCGG ATACCAATGG AGTGGATATT
TACATCGGTA TTAACCGCTA G
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| Protein sequence | MERIHKSAQG LSGLITRTNN AAETEAETAR IGPLWQQYFA ENDGHLTQGK PMYGVYHDYQ
SDMNGDYSVL VGTQAESDDI CDIRLAEGDY LKFSGSGKMP DCVVEQWTEI WRYFSSPECR
HQRNYLTDYE VYPDTNGVDI YIGINR
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