| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2773 |
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| Symbol | |
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| ID | 5612410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3344237 |
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| End bp | 3344917 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933692 |
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| Product | dethiobiotin synthase |
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| Protein accession | YP_001474508 |
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| Protein GI | 157375908 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0132] Dethiobiotin synthetase |
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| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0046697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00857242 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATCTACT TTGTCACGGG GACCGATACC GATTGCGGTA AAACATTCAT CAGTGCTGCG
CTGCTTAATC GGGCCAAAGA GATGGGGAGC CATACTCTGG GACTTAAGCC CATCGCTTCT
GGCTGTGAAA GAACTGAACA TGGGCTTAGA AACAGTGATG CGCTGAGTTT AATGGCAGAG
TCGACTATCG AGCTCGATTA TGCCTTGGTT AACCCCGTTT CATTCGAGCC GGCGATTGCC
CCCCACATTG CCGCCAGCCA AACTGGCGTC GATATCGGCC CCGGGTCGGT ACTCAATCGA
TTGAGTGGTG CACTGGAAGG CTTGAATGGC AGTGAACTAT GTATCATTGA GGGAGCGGGA
GGTTGGCGCT TACCCTTAGG TGAGGGGCAC TTTCTCTCTG AAGTGGTTCA GCAGCTTTCG
GTGCCTGTTA TCTTAGTGGT TGGAGTTAAG CTTGGCTGTT TGAATCATGC TGTACTCACA
CAGGAAGCAA TAAAGGCCGA TGGATTAGAG ATGGGGGGCT GGATTGCCAA CATCGTCGAT
GGCGACACCA GTTGCCTTGA GGAGAACCTG GCCAGCTTAC AGTCATTGAT GAGTGGACCC
TGTTTAGGTG TGGTGCCTCA CCTGAAGGAA CTGAGCATAG AGACGGCCGC AAGCTATCTG
AATATCGACT CTCTGATATG A
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| Protein sequence | MIYFVTGTDT DCGKTFISAA LLNRAKEMGS HTLGLKPIAS GCERTEHGLR NSDALSLMAE
STIELDYALV NPVSFEPAIA PHIAASQTGV DIGPGSVLNR LSGALEGLNG SELCIIEGAG
GWRLPLGEGH FLSEVVQQLS VPVILVVGVK LGCLNHAVLT QEAIKADGLE MGGWIANIVD
GDTSCLEENL ASLQSLMSGP CLGVVPHLKE LSIETAASYL NIDSLI
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