Gene Ssed_2751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2751 
Symbol 
ID5611974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3319029 
End bp3319289 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content47% 
IMG OID640933670 
Producthypothetical protein 
Protein accessionYP_001474486 
Protein GI157375886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.575251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.46355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA CTGCCGAGAT AAGCTGTTAC CCTTTACAAG ATAACTACCT GGATCCGATC 
AGATGGTTTA TCGGTCGGGT CGATAGTTAT TCAAATATCG AGCGTAAAAC CAATGCGATG
GCGACTCAGG TCTGTGGTGA GTACAGCGAT GTGATGTCTA TGCTTGCCGT TGAGATGCAG
GCCGCCCATG AGAAGTGGGG CAAGGCCGTA TTTGTGTGTA AGTTTATTGG TGGTGAGCTG
GATCTCTCTC ACAGCGAATA A
 
Protein sequence
MKLTAEISCY PLQDNYLDPI RWFIGRVDSY SNIERKTNAM ATQVCGEYSD VMSMLAVEMQ 
AAHEKWGKAV FVCKFIGGEL DLSHSE