| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2749 |
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| Symbol | |
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| ID | 5613951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3317129 |
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| End bp | 3318166 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933668 |
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| Product | aminoglycoside phosphotransferase |
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| Protein accession | YP_001474484 |
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| Protein GI | 157375884 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.589565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAG AAAAACGCCT CCATGCAGTG CTGTCAGCAT CGGTTATCGA TGAACTTAAG
CTTGCGGGTT TGAACTTTAC TTCCGAGAGT GTGGTGACGC CTCTCGTTCA TGGCTTGAGT
AATCAAAACT ATCTCATTAA TGACGGTGAG CGAAATTGGG TTCTCAGGGT CAACTCATCG
GCGAGCAGCC AACTCTGTGA TCGTCAATCT GAAGTGAGAA ACTGGAACAT TGCCGCAAAG
CAGGGGTTAG CACCAAAACT GATTTATGTC AGTCCAGATC ATGCTTATTA CCTTAGCGAA
TATATTCAGC AAGCCCATCA AGCACAGTGG GGCAGCCTGT TAACGGCAAA ACCGGCGCAC
CCTTTGATTG ATGATGCGAC ACTATGGCCT GATGCCGAAA CCCTGTTGTT ACCATTCTTA
AGAGGGGTTT CCCGCTTACC TGTCCCCAAA AATAATATTG GTGTAACTAA GCAGTGGGCG
ATCTACCGAG AAAAACTGGC GCTTATCGCT GCTAATCAGT CCACACTCTC CAATTCGGTG
CAGGCAGTGC AATGGCAAGA GAGTCACATG GAGTTGTTGG CATTAGAGAA TGATATTATT
CTCTGGCTCG AACAACTCAA TGCCTGTTCG CACTCAGACC AATACAGTCA CAGGGATCTC
AACCCCCATA ATCTACTGTA TAAAGAGGGG AGGATTTATT GTATCGATTT TGAGTATGCA
TGCAGCTCTC ATCCTCTGTT CGATCTGGCG GGGGTCCTGT CGACCCATGC ACTTTCCACG
GCGCAGCGTC ATTATTTGAT AGAGGGCTAT CTGGACGGTC ACCCCAACTT AACCTCCGCT
GCGAAGGCGG CCCTGCCCGG CGCAATAAAC ATCTATTGGG TCTTCGCCGC CTGTTGGTCT
CTGTTGATGG CCGCCGACAG TAGCGATATT ACCGGTATCT CTCTAAATAA TGAAAAAAAT
GATGAAACTG GGGTTAATCC TCATAGTTCC CAGGAATATC TGGATTGTTT CGATAATTTT
GTTGCGTTAA TCGGCTGA
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| Protein sequence | MNPEKRLHAV LSASVIDELK LAGLNFTSES VVTPLVHGLS NQNYLINDGE RNWVLRVNSS
ASSQLCDRQS EVRNWNIAAK QGLAPKLIYV SPDHAYYLSE YIQQAHQAQW GSLLTAKPAH
PLIDDATLWP DAETLLLPFL RGVSRLPVPK NNIGVTKQWA IYREKLALIA ANQSTLSNSV
QAVQWQESHM ELLALENDII LWLEQLNACS HSDQYSHRDL NPHNLLYKEG RIYCIDFEYA
CSSHPLFDLA GVLSTHALST AQRHYLIEGY LDGHPNLTSA AKAALPGAIN IYWVFAACWS
LLMAADSSDI TGISLNNEKN DETGVNPHSS QEYLDCFDNF VALIG
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