Gene Ssed_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2726 
Symbol 
ID5614106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3291996 
End bp3292154 
Gene Length159 bp 
Protein Length52 aa 
Translation table11 
GC content43% 
IMG OID640933645 
Producthypothetical protein 
Protein accessionYP_001474461 
Protein GI157375861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.414252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC CTCGTTCTAG TCAGGTTAGT TTGGAATATA CGCCCTTTTA TCATTGTGTG 
AGCCGCACAG TGAGAAGGGC GTTTCTGTGT GGAATAGATA ATTACTCTGG CCAATCTTTC
GAGAATATCT TTAGAGGGGG CTTGGTAGTT CTGTTATGA
 
Protein sequence
MPKPRSSQVS LEYTPFYHCV SRTVRRAFLC GIDNYSGQSF ENIFRGGLVV LL