| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2720 |
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| Symbol | |
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| ID | 5611204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3284507 |
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| End bp | 3285778 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933639 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001474455 |
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| Protein GI | 157375855 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.894758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA GCTCGGTGAA ATTCCATAGT CTCAGCAGGC GAATCGTCGC CCAGTTTTGT
ATCTTCACCT TAATAATGTC AGTTATTTAT GGTTTGTTTA GTTTTGTGCT TTTATACAGC
ATCGAAGACA CTTTTATTGA ACGAGAAGTT ACCCAAGAGG CTAGTTATCT CAGCAGTGAA
TACCAAAAAA CCGGGGCGTG GCCGATAATC AGACATGATT ATCTAACGCT ACATTTCTCA
AAAGACAGTT TTCCTCAAGA TCTAAAACAA CAATCTATCC ATCAACTGAA TCGGGCTGAG
TTTTATGGTG AAGAAGGGCG CCATTACCAC TTGTATCAGT TTCCACAATA CCCGGGAACT
TATCTGGTAG CCGAAGTAAG CCAAAAATTA TTAGTGCGTC CTATTCGTGG CGAAGTGGTA
ACGTTTTTAG TATACAGCGG CATAGCGTTA ACATTAATTG CATGTTTGAT AGCTTGGCTG
CTTGGCCGAA AAACGGCAAA ACCACTGCGG GATCTTGCTG AGCTGGTTGA TGGCGTTGCC
CCCGAGAATA TTCCTGACAG TTTCGCTCAC AATTACCCGA ATAATGAGAT TGGTATTTTG
GCACGTACCC TTGAGCAATC GATGCGCCAA ATAAGTCAGG CGTTAGAACG AGAAAAGTGC
TTCACTCGCG ATGTCAGCCA TGAATTAAGA ACGCCGGTGG CCATCGTTAA AAATGCAGTT
GAGCTTTATA AAGAGAAAAA CCCTATTACT GATGAATCCC ACCGTCTCAT CGATCGCATA
GCTGACGCCA CGATACAGAT GGAACAGACG GTAACCACCT TACTCGTGCT TGCAAGAGAA
GAGCACACCA ATGCAGTTCA AGATTCAGTC AAGCTGCTGC CATTGATAGA ACAAGCGATA
CTGGATCACC ACTATTTACT GGCACAAAAA TCTGTTGCAG TAAAAGTGGA TGATAATTGT
GATGCGAGCG TATTTGCTCA ACAAGGAATG CTAAAAGTAT TGCTGGATAA TTTACTGAGT
AATGCCTTTC AATATACAGA CTTAGGTGAA GTTAATATTC GCTTTGTTGA TAAGAAGTTA
GTCATTGAAG ACACGGGCCC AGGAATTGAA AAATCAATCA CTTCACATAT CACTGAACCC
GCTGTAAAAG GGAGTCAAAG CACGGGCTAT GGTTTTGGTT TATCTATTGT CAAACGCTTG
TGTGAACACC AAGGCTGGCA ACTAAACGTA TCGAGTCACC AGGGCACAAA AATATCAATC
GCATTTGTTT AG
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| Protein sequence | MKNSSVKFHS LSRRIVAQFC IFTLIMSVIY GLFSFVLLYS IEDTFIEREV TQEASYLSSE
YQKTGAWPII RHDYLTLHFS KDSFPQDLKQ QSIHQLNRAE FYGEEGRHYH LYQFPQYPGT
YLVAEVSQKL LVRPIRGEVV TFLVYSGIAL TLIACLIAWL LGRKTAKPLR DLAELVDGVA
PENIPDSFAH NYPNNEIGIL ARTLEQSMRQ ISQALEREKC FTRDVSHELR TPVAIVKNAV
ELYKEKNPIT DESHRLIDRI ADATIQMEQT VTTLLVLARE EHTNAVQDSV KLLPLIEQAI
LDHHYLLAQK SVAVKVDDNC DASVFAQQGM LKVLLDNLLS NAFQYTDLGE VNIRFVDKKL
VIEDTGPGIE KSITSHITEP AVKGSQSTGY GFGLSIVKRL CEHQGWQLNV SSHQGTKISI
AFV
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