| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2662 |
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| Symbol | |
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| ID | 5612398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3218884 |
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| End bp | 3219840 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933581 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474397 |
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| Protein GI | 157375797 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3272] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0322791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0202004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAT CCGATATACC TAAGATCAAA ATAGGTATTA GCGCGTGCCT AATGGGTGAA
AAAGTGCGCT TCGATTCCGG GCATAAGAAT AATACCTACA TCCAGGGGAC CTTAAGTGAC
TATTTTGAGT TCACCTCTTT CTGCCCTGAA ATGGACATAG GGTTAGGCGT TCCTAGGCAA
GCTATCCGCC TGGTTTCATC AGTTGAGGGG GTGAAAGCTG TCGGCTCCAG GACTCCCGAG
TTAGATGTCA CAGAACTTCT CTATCAATCG GCAGAAAAGA AAAAAAGATG GCATGAGGAG
TTATGCGGCT ACATATTAAA GAAGGATTCA CCCAGTTGTG GAATGGAGAG GGTGAAACTC
TACAAATCGG AGATGGCAGA ACGTAAAGGC GTTGGTCTGT ATGCAGAACG CCTGATGGAA
AACTTTCCTA ACCTTCCGGT GGAGGAGGAA GGTCGACTAG GAGATGCAAG ATTAAGAGAA
AATTTTATTC AACGGGTCTA CATCTTTTCG AGATGGAAAT CAGTAAAGCA AAATGGCTTT
TCACTGAGTG AGTTACAAAA TTTTCATGCC CGACATAAAT ATATTTTTAT GAGCCACGAC
CAGATCAGGG CTAAGCAACT GGGTAACCTG CTCGCCAATG GAAGCGCTAC CGAGCTGGAG
GATCTCTGTT CAACCTATCT CACCGAGATG ATGGCCCTAT TGAAAAAAGT CGCCAGCAGA
AATAATCATG TCAACACATT GCAACATATT CAGGGGTACC TGAAAAAGCA GTTAACGGCT
GACGACAAAC AGGAAATGCA GGCAAGCATT GAAGCATATC GCAGAGGGTT GTTACCTTTG
ATAGTCCCTA TTACACTCCT GCGTCATCAC TTCAGGCTCT ACCCAAATAC CTATATTACC
GAGTCCTTTT ACATGCAGCC TCACCCGGGT GAACTTATGT TGTTAAATAA TTTATGA
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| Protein sequence | MSESDIPKIK IGISACLMGE KVRFDSGHKN NTYIQGTLSD YFEFTSFCPE MDIGLGVPRQ
AIRLVSSVEG VKAVGSRTPE LDVTELLYQS AEKKKRWHEE LCGYILKKDS PSCGMERVKL
YKSEMAERKG VGLYAERLME NFPNLPVEEE GRLGDARLRE NFIQRVYIFS RWKSVKQNGF
SLSELQNFHA RHKYIFMSHD QIRAKQLGNL LANGSATELE DLCSTYLTEM MALLKKVASR
NNHVNTLQHI QGYLKKQLTA DDKQEMQASI EAYRRGLLPL IVPITLLRHH FRLYPNTYIT
ESFYMQPHPG ELMLLNNL
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