| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2651 |
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| Symbol | |
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| ID | 5612684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3205764 |
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| End bp | 3206399 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933570 |
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| Product | uridine kinase |
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| Protein accession | YP_001474386 |
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| Protein GI | 157375786 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0572] Uridine kinase |
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| TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.212203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTCTC AGTGTGTCAT TATCGGTATC GCGGGGGCGT CAGCCTCTGG AAAAAGTTTA
ATCGCAAAAA CCATCTACGA AGAGTTGTGC CGTGATCTTG GTACCGACCA GATAGGTGTT
ATTGCCGAAG ATGCCTATTA CAGAGATCAG GGACATCTTT CGATGGATCA GCGGATACTG
ACTAATTACG ATCATCCTAA AGCACTCGAC CATGAGCTTT TATGCAGCCA TTTAACGGCC
TTGAAGTCTG GTGAAGCGGT AGAGATCCCT ACCTACAGCT ATAACGAGCA TACGCGTATG
GAAGAGACCA TTAAGATGAC GCCTAAGAAG GTGATCATCC TGGAAGGTAT CTTGCTGCTG
ACCGATCCGG TACTTAGAGA TACTATGGAT GCGAGTGTCT TTATGGATAC GCCACTGGAT
ATCTGTTTTA TGCGCCGCCT TTCTCGCGAT GTTGCCGAGC GTGGCCGTAC TATGGAGTCT
GTAATGTCAC AGTACACAGA GACTGTTCGT CCTATGTTCC TGCAATTTAT CGAACCATCT
AAGCAGTATG CGGATATTAT TGTGCCGCGC GGTGGTAAAA ACCGTATCGC TACCGATATT
CTCAAGACTC GAATTCAGCA TCTGTTAGCA AAATAA
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| Protein sequence | MNSQCVIIGI AGASASGKSL IAKTIYEELC RDLGTDQIGV IAEDAYYRDQ GHLSMDQRIL
TNYDHPKALD HELLCSHLTA LKSGEAVEIP TYSYNEHTRM EETIKMTPKK VIILEGILLL
TDPVLRDTMD ASVFMDTPLD ICFMRRLSRD VAERGRTMES VMSQYTETVR PMFLQFIEPS
KQYADIIVPR GGKNRIATDI LKTRIQHLLA K
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