| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2646 |
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| Symbol | |
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| ID | 5612756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3201814 |
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| End bp | 3202140 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933565 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001474381 |
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| Protein GI | 157375781 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.109453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGATC TAGTTGTTAA TTTTGACACC CTACATCAGC TTTACCGCGC TTACATGCCC
TTTATTAAGC CGGCAGGTTT GTTCGTTGCG ACCACGGAAA GCCATTATCT GGGGCAAGAG
TTAACGATTG CATATCAACT TCCCGGCTCA ACCTCTAAGC ACCAGTTTGA GGGGGTCGTG
GTTTGGATCA ATCCATTAGG AGCCTCAGGT GGTCGGCCCG CAGGCATTGG TGTGAAAATA
TTAACGGATC CCGATACCCA CAAGCACCAT ATTGAAAACC TGTTATCCAG AGAGCTCGCG
TCCGGTGATT TGACCTGCAC CATGTAG
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| Protein sequence | MIDLVVNFDT LHQLYRAYMP FIKPAGLFVA TTESHYLGQE LTIAYQLPGS TSKHQFEGVV
VWINPLGASG GRPAGIGVKI LTDPDTHKHH IENLLSRELA SGDLTCTM
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