| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2610 |
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| Symbol | |
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| ID | 5610938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3163286 |
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| End bp | 3164119 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933529 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474345 |
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| Protein GI | 157375745 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.129841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACAGA TAGGCAAAAC CAGCACACTC GAAGTCGTCA AAATCGTTGA ATTTGGCGTT
TATTTAGATG GACAGGAACT CGGTCAAATA CTTCTACCGA CCAAGGTCAT GCCAAAAGAG
TGTAACTTAG GCGATATGTT AGAGGTGTTT ATCTATCTGG ACTCAGAAGA TAAGCTCATT
GCTACCACGC GTAAGCCTTT AGCTGAAGTT GGCCAATTCG CCTATTTAGA AGCCGTCGCT
ACCGGACCAT TCGGTGCATT TCTAAACTGG GGTTTAGACA AAGATCTACT GCTTCCTTTC
GGTGAACAAC ACCGTGAAAT AGAGGAAGGT CGCTCTTACC TTGTCTACAT TTACCAGAGT
CATGTCGATG ATCGCATCGT AGCCTCTTCA AAGATCGACA GATTTCTCGA CACGACACCA
CCTCCCTATG ATGCAGGCGA AGAGGTGAAT CTGATTATCG GTGGTACTAC CGATCTCGGT
TACAAGGCAA TTATTAATCA CAGCCATTGG GGCGTGATCT TCAAAAATGA AGTGTTCCGC
ACACTAAGCT TCGGTCAGCG AATGAAAGGT TTCATTAAAC AGGTTCGCAG TGATGACAAA
ATTGACCTTA TCTTGCAAAA AGGGGTCAAA GAAGAGTTAG ATAAGCATTC GACGACTATC
ATGTTTAAGC TTAAACAAGC CGGTGGTTTC CTACCGTTAA ATGATAAGAC GGATGCCGAT
ACCATTTATG CCAAGCTGTC TATGAGTAAG AAAGCCTTCA AGAAGAGTAT CGGTGGCTTA
TATAAAGCAA AACAGATCAC CATCTCTGTC GATGGAATAA GGTTGGTCGA TTAA
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| Protein sequence | MIQIGKTSTL EVVKIVEFGV YLDGQELGQI LLPTKVMPKE CNLGDMLEVF IYLDSEDKLI
ATTRKPLAEV GQFAYLEAVA TGPFGAFLNW GLDKDLLLPF GEQHREIEEG RSYLVYIYQS
HVDDRIVASS KIDRFLDTTP PPYDAGEEVN LIIGGTTDLG YKAIINHSHW GVIFKNEVFR
TLSFGQRMKG FIKQVRSDDK IDLILQKGVK EELDKHSTTI MFKLKQAGGF LPLNDKTDAD
TIYAKLSMSK KAFKKSIGGL YKAKQITISV DGIRLVD
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