Gene Ssed_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2602 
Symbol 
ID5610708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3156009 
End bp3156392 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content46% 
IMG OID640933521 
Producthypothetical protein 
Protein accessionYP_001474337 
Protein GI157375737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0738008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAT TATTAAGTGG CTTTGATCAT GATACGGTCG CTATCAGGGC GTCGGGAGTG 
GTCACGGGTG AAGATTATGA CCAAGAGCTG TTGCCTGTCA TCGAAGAAAA ATTGAAAGAT
CATGCGTGCA TTAAACTTTG GTACGAATTT GATGAAGCCT TTGAGGGTAT TTCTGTTGGA
ACCCTCTGGG ATGATGCAAA ACTCGGTCTG TTTCATCTGA CCGACTTTTA TCGTGTGGCG
TTTATTACTG ATAGTCGGTT GGTCGCCGGG ATGGCGAATG CGTTAGCCTA TATGATCCCC
TGTCCGGTTA AGGTCTTCGA GCGAAGTGAA ACAGGACAGG CATTACAATG GATGAAAGAG
TCAGAGACGA GCGAAACTGT TTGA
 
Protein sequence
MLKLLSGFDH DTVAIRASGV VTGEDYDQEL LPVIEEKLKD HACIKLWYEF DEAFEGISVG 
TLWDDAKLGL FHLTDFYRVA FITDSRLVAG MANALAYMIP CPVKVFERSE TGQALQWMKE
SETSETV