Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2602 |
Symbol | |
ID | 5610708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3156009 |
End bp | 3156392 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640933521 |
Product | hypothetical protein |
Protein accession | YP_001474337 |
Protein GI | 157375737 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0738008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTAAAT TATTAAGTGG CTTTGATCAT GATACGGTCG CTATCAGGGC GTCGGGAGTG GTCACGGGTG AAGATTATGA CCAAGAGCTG TTGCCTGTCA TCGAAGAAAA ATTGAAAGAT CATGCGTGCA TTAAACTTTG GTACGAATTT GATGAAGCCT TTGAGGGTAT TTCTGTTGGA ACCCTCTGGG ATGATGCAAA ACTCGGTCTG TTTCATCTGA CCGACTTTTA TCGTGTGGCG TTTATTACTG ATAGTCGGTT GGTCGCCGGG ATGGCGAATG CGTTAGCCTA TATGATCCCC TGTCCGGTTA AGGTCTTCGA GCGAAGTGAA ACAGGACAGG CATTACAATG GATGAAAGAG TCAGAGACGA GCGAAACTGT TTGA
|
Protein sequence | MLKLLSGFDH DTVAIRASGV VTGEDYDQEL LPVIEEKLKD HACIKLWYEF DEAFEGISVG TLWDDAKLGL FHLTDFYRVA FITDSRLVAG MANALAYMIP CPVKVFERSE TGQALQWMKE SETSETV
|
| |