Gene Ssed_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2593 
Symbol 
ID5610763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3144171 
End bp3144494 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content47% 
IMG OID640933512 
Producthypothetical protein 
Protein accessionYP_001474328 
Protein GI157375728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGT TACTACAGGT CGATTTTGGT TTTAATGGCC CTTTTGGAGA TGAGATGGCG 
ACCATGCTTG CCGGTTTAGC CGAGTCAATT AACCATGAGC CAGGAATGAT TTGGAAGATA
TGGACCGAAA ATGAAGCTAA GCAGCTCGGC GGTGGAGTGT ATCTGTTTGA AGATGAAGCG
AGTGCACAGG CCTATCTGGA GATGCATACG GCTCGTTTAA GTAAGATGGG GATATCAGGT
ATCAGAGGGC TAATTTTCGA TGTAAACCAG ACGCTATCTA AGGTTAACCA CGCGCCACTA
GCGCAGAAGA AGGCGCAGAA GTAA
 
Protein sequence
MQKLLQVDFG FNGPFGDEMA TMLAGLAESI NHEPGMIWKI WTENEAKQLG GGVYLFEDEA 
SAQAYLEMHT ARLSKMGISG IRGLIFDVNQ TLSKVNHAPL AQKKAQK