| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2555 |
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| Symbol | |
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| ID | 5610085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3102098 |
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| End bp | 3103693 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640933474 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474290 |
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| Protein GI | 157375690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.291099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGAA TAACAGCCCT GTTAACTGCC ATTTTGTTTC CTGCCTATGT ACTTGCAAAC
GCCGATTTTC CTTCACATGT TGGAAAATCG CCATTTAGTT TTGACAAAAA TAATATTCCT
TCAAATACTT TTGTCGTCTC GGATAAAGGC CAAGACAATG ATGTTTACCT TAAGCGAGAT
GACTCAAAGA TATTTGATTA TCAATTTAGT TTGAAAATAG ATCGTTATGT TGGGGATATA
ACCAAGCTAA AAGAGAATAA GTTGATATCA GAGAAGTTCG TAATATCAAT GCCAGTGTTC
GATGTTGACA ACGAATCAGC TTTGGAAGAC TGCGATTATG ACGGTGAGCC TGATCAGTTA
ACTCCCGAAG TCGATGAGGT GTATTTTAAC GGAGAAAAAA TTGGAGTGTT GTCAGGATCT
AATGAGTTAT GGGTACAAAA TAGATTCGAA CTGGACATTT CTAAACTAAA CCTCCCTACC
TCTCAAGGTG AAGTTAGTGA AAACGTAGTA CAGATAAGAA TTGATGCTGG CAATGAATTT
GTGGAGCTCA GCTCTGGAAA AATTGGCTGT CAGAAATGGG CGGTTGAAAT TGATTATGTC
ACTCTGGAGT ATGAAGTCGT AGACCCGGTA CTATTGATTG TCGGACTTGG CGGTAGTCCT
GACGTTATGA CAAGTGCTCA AAGTAATTAC ATAGGGTTAA TGGATAAGTT AGGTATTCCA
TACCAAATAG CCTCTCATGA CCTCTCTGCT CAGATTGATA GCTGCATCGA TGGGGGAACT
CCATCTTTTA TTGAGCATGG ACGAAACGTT AGGAGTGTAG CGGTTGAATT TTCGGAGACA
TTGAAAACCA ACGAATTTAA TTTGATAGCC CACTCTAAAG GCGGGCTTGA TTCAAGATGG
TTTATCAAGA ATATTAATGC CGAGCCTTTA TCTGTTTCCG TGGGGTTGAT GGATAACAGT
GTTGTGAAAA ATGCCTTGGC TGTTAATTCA CTCGTTACTC ATAGCACTCC TCATTATGGC
ACCGTGGTTG CGGATGCAAT CGATTATAAC CAAATATTCC ATGAATTTAT AAATATAGCA
ACTAAAGCCA TTCTTACAGA CATTTGTGAC TTAAAAACGG ATACGGCGAC AGAATTTACT
AGACGCCATC AAATACCCAA AGGAATAAAA TACCTCGCCA TCGGCGCAAA CATAGATGCT
GATAAGGATG GTAAAGTTGA CTGGGTGGAA AATCTGCACA ATCAACTTCC TTCAAGAATA
CTGGCGACGA AAACTTTTCT AAAGATTAGG GACGTAAAAG AATACATTGT TGAGGAAGAA
TATGCCGATC TGTATTGGCC TCAACAAAAT CCTCCCCTAA CAATACCTGT GTTCACCTCT
GTGGTTAATG ATGAGCCGCA ATTTAATGAC TCCCTAGTAA GCTTAAAAAG TGCCATCCCA
ATGGATGCAA CAAAAACCGT TGCAACCATT GGTAATCATA ACACTGTGCT TCGTGCAAAT
CCTTATGGGG ACATTTGGAC AGGGGCGCAA GACATAGTCA GAGAGGAGGT GTTAACTGGA
ATGCTGAAAT GGAGTGTTGG CAATGAAAAT AACTAA
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| Protein sequence | MLRITALLTA ILFPAYVLAN ADFPSHVGKS PFSFDKNNIP SNTFVVSDKG QDNDVYLKRD
DSKIFDYQFS LKIDRYVGDI TKLKENKLIS EKFVISMPVF DVDNESALED CDYDGEPDQL
TPEVDEVYFN GEKIGVLSGS NELWVQNRFE LDISKLNLPT SQGEVSENVV QIRIDAGNEF
VELSSGKIGC QKWAVEIDYV TLEYEVVDPV LLIVGLGGSP DVMTSAQSNY IGLMDKLGIP
YQIASHDLSA QIDSCIDGGT PSFIEHGRNV RSVAVEFSET LKTNEFNLIA HSKGGLDSRW
FIKNINAEPL SVSVGLMDNS VVKNALAVNS LVTHSTPHYG TVVADAIDYN QIFHEFINIA
TKAILTDICD LKTDTATEFT RRHQIPKGIK YLAIGANIDA DKDGKVDWVE NLHNQLPSRI
LATKTFLKIR DVKEYIVEEE YADLYWPQQN PPLTIPVFTS VVNDEPQFND SLVSLKSAIP
MDATKTVATI GNHNTVLRAN PYGDIWTGAQ DIVREEVLTG MLKWSVGNEN N
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