| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2533 |
|---|
| Symbol | |
|---|
| ID | 5610309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 3078437 |
|---|
| End bp | 3078910 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640933452 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001474268 |
|---|
| Protein GI | 157375668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.901213 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG AAAACGCCTT TCATTGGATT ATCGATTTTC TTGAGCAGGA GTCTGTTCCC
TATATGATCA TGGGCGGACT CGCGGCATAT GCATACGGTT CAGAAAGAGA GCTTTATGAT
GTTGATCTCT ACATTCCTCA GTTGGCATTA GCGGCCGTTG CTGACTATGG CAAAGGTGCT
AAGACCTTTG GCCCTTCCAG ATATAAAGAT GAATTTTGGG ATATTGAGGG AACGCAATTT
GTTGTAGATA GTGTAAAAGT TGAAATCACC ACCGACCATA ACTGCCGATT CTTTTGTGAG
AAAGACTCAA TGTGGATTGA GCAGAATATA GACTTTGATT CTACTGTCAC CAAAACATTG
TTCGGTCGTG AAGTCGAAGT AATGAGACTC GACCACTTGC TAAGCTATAA AGCGCAATTG
GCCCGGGATG TTGATCTGGA TGATGTCTGC AGGCTGGAGG AGGCTATCGG ATAA
|
|---|
| Protein sequence | MSYENAFHWI IDFLEQESVP YMIMGGLAAY AYGSERELYD VDLYIPQLAL AAVADYGKGA
KTFGPSRYKD EFWDIEGTQF VVDSVKVEIT TDHNCRFFCE KDSMWIEQNI DFDSTVTKTL
FGREVEVMRL DHLLSYKAQL ARDVDLDDVC RLEEAIG
|
|---|
| |