| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2529 |
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| Symbol | |
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| ID | 5609858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3072772 |
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| End bp | 3073470 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933448 |
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| Product | GMP synthase glutamine amidotransferase subunit |
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| Protein accession | YP_001474264 |
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| Protein GI | 157375664 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.777754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCATTG GGATTTTACA ATGTGATGAT GTCAGAGAGT CGCTAAGAGA TCGACACGGG
AACTACCCCG AGATGTTTAC TGCTCTGTTT GGGTCTGTCG ATGCGAAAAT AGGGTTTAAG
GTGTATCGGG TGACCGAGGG GGTTTATCCT GAGTCAATCG ATGAATGTGA TGTCTATATC
ACGACCGGAA GCCGATACAG CGTCAACGAC GATGCACCAT GGATAGCAGA GTTTCAAGCC
TTTATCACTC AGCTATATCT TACAAAGAAG AAGTTTATCG GGATCTGTTT TGGTCACCAG
ATGATGGCGA AGGCACTGGG AGGGGAGGTG GTGACCTCCC CGAAAGGGTG GGGGATCGGA
GTCATGATCA CGACGATTAA ACATAGACCC ACTTGGATGG AGATGGATGC GCAGCAACTT
GCATTAGTGG TGAGTCATAG AGACCAAGTC ACAAAAATGC CGACAGGCTC AGTGCTTATC
GCGGGTAGTG AATTTTGCCC CTGTTACATG ATGCAGCTTA ACGACCATTT CTTAGGGATC
CAGGGCCATC CGGAATTTAG TAAAAGTTAT GCCAAAGATC TTATGATGGC AAGACGCGAC
ATCATTCCCG CTCAGCGGAT AAAGAGTGGC ATAGAATCAT TATCTTTAGT GGTAGATGAT
GAGTTGGTGA GCCGGATCTT GCTGAGTTTT ATAAGATAA
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| Protein sequence | MIIGILQCDD VRESLRDRHG NYPEMFTALF GSVDAKIGFK VYRVTEGVYP ESIDECDVYI
TTGSRYSVND DAPWIAEFQA FITQLYLTKK KFIGICFGHQ MMAKALGGEV VTSPKGWGIG
VMITTIKHRP TWMEMDAQQL ALVVSHRDQV TKMPTGSVLI AGSEFCPCYM MQLNDHFLGI
QGHPEFSKSY AKDLMMARRD IIPAQRIKSG IESLSLVVDD ELVSRILLSF IR
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