| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2526 |
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| Symbol | |
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| ID | 5609994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3070628 |
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| End bp | 3071338 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933445 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474261 |
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| Protein GI | 157375661 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.755196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.82322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGACT CGTCAGCTCA GGGCATCACC ACGGGCAGAG AGAGTCAAAC CGGAGCACCC
GGTCGGGGCC GTTTCTTGAT TGAGTTACTG ATGGCGCTGG TGATCACACG TCTGCCTTTT
ATCAATGTAC CGTTTAAATG GCTCGAAAGT TATTTTCATG AACTCTCTCA TGGTTTAGTG
ACGCTGTTGA CTGGCGGCGC AGTCAGTCAT ATTCAACTAT TTCCTAATGG CGCCGGATTA
TGTTTCAGTC AGGGTGGCTG GCCTGTCGTC ATCGGTTTCA GCGGCTACTT CGGTGCTGCG
TTATGGGGGT ATCTGATCTT TATTCTGGCC ACCTGGCCAA AGGGGATCCG GATGAGCTTC
GCCTTGTTGG GGTCTGCCGT TATTGTCACA ACCTTGCTTT GGGGCAGGGA TCTGCTGACG
ATCTCTATTC TCGCTTGCCT CGCCGTCTTG TTCCTGTTGC CGCTTAAACT TAGCCGTAGT
CGATTTTTAG CTAGTGGCCT GCGGGTGATG GCTTTGATGA TCATGCTTAA CGCGCTCGCG
AGCCCAACGG TCTTGTTAGG GCTGGGTGGC AAAGGTGATG CGGCCATGTT AGCCACGCAG
ACCTGGATAC CAGCCTGGAT ATGGGTCATG GCTTGGTTGG CAATCAGCTC GGTGATGATT
TTTCTATGTT GGCGACGGGT CGATAGTGCG GCACAAAGTG CAGCAGTTTA A
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| Protein sequence | MLDSSAQGIT TGRESQTGAP GRGRFLIELL MALVITRLPF INVPFKWLES YFHELSHGLV
TLLTGGAVSH IQLFPNGAGL CFSQGGWPVV IGFSGYFGAA LWGYLIFILA TWPKGIRMSF
ALLGSAVIVT TLLWGRDLLT ISILACLAVL FLLPLKLSRS RFLASGLRVM ALMIMLNALA
SPTVLLGLGG KGDAAMLATQ TWIPAWIWVM AWLAISSVMI FLCWRRVDSA AQSAAV
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