| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2516 |
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| Symbol | |
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| ID | 5610979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3061681 |
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| End bp | 3062121 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933435 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474251 |
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| Protein GI | 157375651 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2983] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000909068 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.84957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTTTT GGAAGAATAA AACCTTAGCA GAGATGGACA CCCAAGAGTG GGAGTCACTC
TGTGATGGTT GTGGTAAATG TTGTTTAAAC AAGTTGATCG ATGATGAAAC CGAAGAACTT
TATTATACGA ATGCAGCCTG TAAATTATTA GATCCTAAAG ATGGACATTG TGTCCACTAT
GTTCAGCGTT TCAATTTTGT CCCCTCCTGC ACGCAGGTCA CCGTCGATAA TGTCGCCGAG
CTAACCTGGT TACCGGATAG CTGCGCATAC CGTCGTCTGC ACCTTGGTCG CGAGCTTCCC
TCCTGGCACC CGTTAATCAC AGGTTCAAAA GAGGCGATGC ATATTGCTGG GATGTCGATT
AAGAATAAAG TGACTTGTGA AACTAAAGTG AAGTATATGG AAGACCATAT CGTGCTCTGG
CCCTTAAAAG ATATCGAATA G
|
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| Protein sequence | MSFWKNKTLA EMDTQEWESL CDGCGKCCLN KLIDDETEEL YYTNAACKLL DPKDGHCVHY
VQRFNFVPSC TQVTVDNVAE LTWLPDSCAY RRLHLGRELP SWHPLITGSK EAMHIAGMSI
KNKVTCETKV KYMEDHIVLW PLKDIE
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