| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2456 |
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| Symbol | |
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| ID | 5612662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2982149 |
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| End bp | 2982583 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933371 |
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| Product | glutathione-dependent formaldehyde-activating, GFA |
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| Protein accession | YP_001474193 |
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| Protein GI | 157375593 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3791] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.198045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.396382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGCGA AACCAAGTTT TCAAGGTAGC TGTTTCTGTG GAGCGGTTCA ATTTACTGTT
AAGGGTACAC CAAATGGCAT GGGATATTGT CACTGTGAAT CTTGCCGAAA GTGGTCGGCA
GGACCTGTAA ATGCATTTAC CCTATGGGAG CCCGAAGCTA TTAGCATCAC TGCCGGTGCC
GATAAAATTT CCAGCTTTAA TAAGACTCCC GGTAGTACGC GCAAATGGTG TAGTGAATGT
GGCGGACACA TTATGACTGA ACACCCGACA ATGAATTTAA TTGATGTATT TGCTGCAAGT
ATTCCATCAC TTAAGTTTGA GCCGGGTATT CATGTTCATT ATCAAGAAAG TGTTTTACCT
ATTAAAGACG GTTTACCGAA AATGAAAGAT ATGCCGAGTG AAGCCGGTGG TTCAGGTGAA
ACCATGCCTG AATGA
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| Protein sequence | MSAKPSFQGS CFCGAVQFTV KGTPNGMGYC HCESCRKWSA GPVNAFTLWE PEAISITAGA
DKISSFNKTP GSTRKWCSEC GGHIMTEHPT MNLIDVFAAS IPSLKFEPGI HVHYQESVLP
IKDGLPKMKD MPSEAGGSGE TMPE
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