| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2439 |
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| Symbol | |
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| ID | 5609662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2961094 |
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| End bp | 2961465 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933350 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474176 |
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| Protein GI | 157375576 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3308] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00685345 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCTCTA ACACCTTATT TAAATTATGC CGGGCAGGTT ATATGGCTCT GGTCATTCTA
TTAAGTGCTT GGTTTATCAA TAAAGGGATA ACGGGAGAAT ACTCTCTAGC GTTTGCTGCG
CTATGGATAA TACCACTCCT GCTGCCGCTA AAAGGTGTCT TAACCGGCAA GCCTTATACC
TATGCTTGGG GAAGTTTCAT CATCTGTTTA TATATGTTAC ATGGATTAAC GTTACTCTAT
GTAACAGATG AACATCTGCT ATTTGCCCTA ACCGAAGTCA TGCTACTAGG TGCATTGCTG
GTCGGATTTC CTTTTTACGC CCGCATTCGA GGTCGTGAAT TGGGTCTGGG ATTAAAAAAG
AAAGCAAAGT AA
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| Protein sequence | MSSNTLFKLC RAGYMALVIL LSAWFINKGI TGEYSLAFAA LWIIPLLLPL KGVLTGKPYT
YAWGSFIICL YMLHGLTLLY VTDEHLLFAL TEVMLLGALL VGFPFYARIR GRELGLGLKK
KAK
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