Gene Ssed_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2396 
Symbol 
ID5613643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2918040 
End bp2918189 
Gene Length150 bp 
Protein Length49 aa 
Translation table11 
GC content45% 
IMG OID640933307 
Producthypothetical protein 
Protein accessionYP_001474133 
Protein GI157375533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCTC AAGCGGTATA CATCTTATTG GCACTGTTGT CGGCAATCAT GATGGGCACT 
ATAGGGGTAT TCGCTAAATA TGCAGCCCTG CCCGCCGAGC AGATCACTTT TTTCAGGCTC
CTGTTGGGTT CACTGTTTTT AATCAAATAA
 
Protein sequence
MQSQAVYILL ALLSAIMMGT IGVFAKYAAL PAEQITFFRL LLGSLFLIK