| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2381 |
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| Symbol | |
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| ID | 5612251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2896701 |
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| End bp | 2897642 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640933292 |
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| Product | glycosyltransferase, group 2 family protein |
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| Protein accession | YP_001474118 |
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| Protein GI | 157375518 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0315564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAA TAAGCTTTAT AGCCCCATGT TATAACGAAG AAGAAAATAT TTCCGAGTTT
TACAAAAGGG TTAAGTCAGT GGCCAGAGAG TTTGATGATT TTGAGTTTGA GTTTGTTATC
GTTAACGATG GAAGTCATGA CGAGAGTGAA ACGATTCTGG ATAAGTTGGC AGACATAGAA
CCTAGATTAG TGGTTATTCA TCTTGCACAA AATATGGGAC ATCAAACGGC ACTTTTTGCA
GGGATTGAAG CAGCAGATGG TGATATTAAT ATAACGTTGG ATATCGACCT TCAAGACCCT
CCTGAGATGC TAGCAAAATT TTTAGAGAAA ATAGAGCAAG GATATGAAAT AGTCCATGCT
CAAAGGAGTG TCCGAAACGG GGAAACAGTA TTCAAAATAT TAACCGCGAA ATTTTTTTAT
AAGTTTATAA AACTGGTATC AAAGCTCGAT TTGATAGACA ATAGTGGCGA TTTTCGTGCA
TTTACAAAGC CAGTGAGGAT CATTATTTCC CAGTTTAGAG AGAAACACAA ATTTCTCCGT
GGGCTATTTG TTCTGGTAGG GTTTGCACAA ACTAGTATAA AGTACGAGCG CCATGAAAGG
TTGGCTGGTG AGACTAAATA CACCTTAGCT AAAATGATAA GGTTGGCTGT TGATGCGACA
CTAAATTTTT CGCATTTTCC TATACACCTG ATGTTTGTGG TTTCAAGTTT AATGTGGTCA
CTTAGTCTTC TATATTTATT CGCGGCTGTC TTAGCAAAGT TTGTGTTCGG AACTGCTATT
CAAGGTTGGA CATCAATTGT TTTCCTTCAG GTTTTTTTTG CTGGAGTTCT ACTATTTTTT
ATTGCCTTGT TAGGGGCTTA TATTGGACGT ATTTATGAGC AGGGGCAGGA TCGGCCATTG
TATTGGATAA GAAAAGTAAG GAACTATAAG GGAGATAAAT AG
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| Protein sequence | MQKISFIAPC YNEEENISEF YKRVKSVARE FDDFEFEFVI VNDGSHDESE TILDKLADIE
PRLVVIHLAQ NMGHQTALFA GIEAADGDIN ITLDIDLQDP PEMLAKFLEK IEQGYEIVHA
QRSVRNGETV FKILTAKFFY KFIKLVSKLD LIDNSGDFRA FTKPVRIIIS QFREKHKFLR
GLFVLVGFAQ TSIKYERHER LAGETKYTLA KMIRLAVDAT LNFSHFPIHL MFVVSSLMWS
LSLLYLFAAV LAKFVFGTAI QGWTSIVFLQ VFFAGVLLFF IALLGAYIGR IYEQGQDRPL
YWIRKVRNYK GDK
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