Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2314 |
Symbol | |
ID | 5611123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2805274 |
End bp | 2805591 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933224 |
Product | hypothetical protein |
Protein accession | YP_001474051 |
Protein GI | 157375451 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000296556 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000816285 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGTTAA TTGAATGCCC AAGTTGTAAG AAACGGATCT CTAATAAAGC TAAGGAATGT AGCGCATGTG GTGCAAACCT CTCAGGGAAT ACTGAGTCAT TGTCGCTGAT AAGCAATATT AAACGCTCTA ATCAGCTGAT GAATCAAAGC CTGTTATGCA TGTCTCTGTT TATTGCAGGT GTAGTGGTCT GGTTTTGGGG CGGAGAGCCG GCTCAAGGGG TAAGGTCTTA CATTGCCGGT GGTCTTTTCG TATTGGGCTT TGTTGGCTAC TTAATAACCA GGGTGAGAAT CGTCTTGCAT AAGCGGAAGA GAGTATGA
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Protein sequence | MALIECPSCK KRISNKAKEC SACGANLSGN TESLSLISNI KRSNQLMNQS LLCMSLFIAG VVVWFWGGEP AQGVRSYIAG GLFVLGFVGY LITRVRIVLH KRKRV
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