| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2230 |
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| Symbol | |
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| ID | 5612363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2691243 |
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| End bp | 2691713 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640933140 |
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| Product | bacterioferritin |
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| Protein accession | YP_001473967 |
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| Protein GI | 157375367 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2193] Bacterioferritin (cytochrome b1) |
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| TIGRFAM ID | [TIGR00754] bacterioferritin |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.769936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGGCA AGACGAAGAT AACCAGTGCA CTTAACCAAA TACTGCTGCT TGAGCTCACT
TCGATTAATC AATATTTTTT ACATGCACGA ATGTATAAAA ACTGGGGACT CGAGGAACTC
GACGAAAAGG AGTATAAAAA ATCCATATTA GATATGAAAC AGGCCGACTC CTTGATTGAA
AGGATCCTAT TTCTCGAGGC TCTTCCTAAT CTACAACAAT TGAATAAGTT ACGTATCGGT
GAGCACGCCG AAGAGATGAT CGAGTGTGAC AAGATTTTAC AAGAAGAACA AATTGCAGAA
CTGCGCAGTG CCATTTATCT ATGTGAGCAA GAGCAGGACT ATGTTAGCCG TGAACTGCTG
GATAAAATTT TAGAAGATGA AGAAGATCAT CTGGATTGGA TTGAGTCGCA GCAATACCTG
ATCAATACAA CCGGTGTACA GAATTATCTA CAATCTATGA TGGAGGATTA A
|
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| Protein sequence | MKGKTKITSA LNQILLLELT SINQYFLHAR MYKNWGLEEL DEKEYKKSIL DMKQADSLIE
RILFLEALPN LQQLNKLRIG EHAEEMIECD KILQEEQIAE LRSAIYLCEQ EQDYVSRELL
DKILEDEEDH LDWIESQQYL INTTGVQNYL QSMMED
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