| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2156 |
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| Symbol | |
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| ID | 5612020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2608441 |
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| End bp | 2609805 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933060 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473893 |
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| Protein GI | 157375293 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1797] Cobyrinic acid a,c-diamide synthase |
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| TIGRFAM ID | [TIGR00379] cobyrinic acid a,c-diamide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.640645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTAG ATAACGCCTA TTGCCCCGCC CTGTTTGTCA CGGCGCCAGG TAGCGACAGC
GGTAAAACCA CCTTGGTCGC CGCCATGGCA AGGTATTGGA GCAACCGGGG CAAGAAAGTC
AGAGTCTTTA AAACCGGACC GGACTTTATC GACCCTATCT TTCATGAATT CGCCAGCGGT
TCTCCTGCCC ATCAACTGGA TCTAGGCATG ATGGGCGAAA CCATCTGCAG ACAGCACCTC
TATCAGGCCG CCTTGGAAGC CGATCTGATT CTTATCGAAG GTGTGATGGG CATGTTCGAT
GGGGCCAACA GTAGCGCTAA CCTTGCCGCC AAATTCGGTA TTCCACTGCT TGCGGTGATC
CCCGCAGCCA AGATGGCACA AACCTTCGGG GCGATCGCCT ATGGTCTTGC CCACTATCAG
GATAACGTCA ACCTGTTCGG TGTTATCGCC AACTATGTAG GCAGCCCGGG GCATGCCGCC
ATGCTTGAAG ATAGCCTGCC TGATGGCATC GAGTTTTGTG GTGCCATGCC GCGGGACAGC
AGCCTCGCCC TACCGGAAAG ACATCTTGGC CTGGTACAGG CGAGCGAGAT AGAGGGGATA
GACGAGTGGT TGGACAGAGC CGCGAAAGCC CTGGGAGACA GCTGCGTACT GCCGCTACCT
GCCCCCGTCT GTTTTGAAGC ACCTGACAGT GAATCGGACA ATTTTTTATC CTCAGCACCA
GTATCAAATT TGGCATCCCA GCATCTTAGT GGCCAAACCG TAGCCGTAGC CAAAGATGCC
GCCTTCTCGT TCATCTATCA GGACAACATC ACCCTGCTTG AAAGCTTAGG TGCTCAGATT
CAATATTTCT CCCCAATTAA CGACAAGAGT TTACCAACGG CTGACAGCCT CTATCTTCCC
GGAGGCTACC CGGAACTACA CCTAAAAGCA CTGAGCGAGA ACATCTCAAT GTGCACCTCT
ATCAAACATC ACATTCAGAG TAATAAACCA ACCCTGGCCG AATGTGGCGG CATGCTCTAT
CTGCTGGATC AATTGACGAC GAAGAGCGGA GAGACGACCG ATATGGTGGG CGCATTGCCA
GGCAAAGCAT CGATGCAGGA TAAACTGCAA GGTCTGGGTA TGCTTAGCGC CGAAATCATT
GGCCATAGCT TGACCGGACA CTGCTTCCAC TACTCCAAAT CTGATATAAC TCAGCTACCA
ATCGCAATTG CATCCCAGGC GGGTAAAACC CGAATGCAGG AGCGGGTGTA TCTGCACCGC
AACACCCTCG CCTCCTATGT TCATTGGTAT CTGCCAAGTT CACCACAGCT GGTTTGTCGA
CTCTTTCTGG GTCAACTCAA TTGTACAGAT GGAGCCTCGA TATGA
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| Protein sequence | MSLDNAYCPA LFVTAPGSDS GKTTLVAAMA RYWSNRGKKV RVFKTGPDFI DPIFHEFASG
SPAHQLDLGM MGETICRQHL YQAALEADLI LIEGVMGMFD GANSSANLAA KFGIPLLAVI
PAAKMAQTFG AIAYGLAHYQ DNVNLFGVIA NYVGSPGHAA MLEDSLPDGI EFCGAMPRDS
SLALPERHLG LVQASEIEGI DEWLDRAAKA LGDSCVLPLP APVCFEAPDS ESDNFLSSAP
VSNLASQHLS GQTVAVAKDA AFSFIYQDNI TLLESLGAQI QYFSPINDKS LPTADSLYLP
GGYPELHLKA LSENISMCTS IKHHIQSNKP TLAECGGMLY LLDQLTTKSG ETTDMVGALP
GKASMQDKLQ GLGMLSAEII GHSLTGHCFH YSKSDITQLP IAIASQAGKT RMQERVYLHR
NTLASYVHWY LPSSPQLVCR LFLGQLNCTD GASI
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