| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2141 |
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| Symbol | |
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| ID | 5610551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2590323 |
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| End bp | 2591156 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640933045 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473878 |
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| Protein GI | 157375278 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0962248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGATG ATTCGATTCA AACTAAAATG TGTTTGTTTT CACAATGTTT CTACCTGGTG
ACTATTTTGA CTGAAAATTG CCCGCTGTCT GTCGGTATTA TTCAAGACTT TCTTGCTTCT
CTGGAAGCCT TAGGGATCAA TGGCTTCTTT TATGGTATTA CCTCCAATAT TAATCTGGGT
CAGGTACACC CCTTTAAGAA GCTGGAGAAA CGCTTACCAT TAGAGATGGC TAAAGTTCAT
TATGCTGTTT TCTCTGACGA GAGAACCAGA CTCTACAGAG ACGCCTATCT CAACGTATTT
GCTCGTCATG ATGAGTACTA CTTCGAAAAG AAAGTCGTCG GCCCCAATCT CTGGCGGCAA
CCCGATGCGA GCCAGGCTCA GTTACTTAAT TTACTGAAAG ATAATGAGAT AAACAGCCGG
GTCGCCTGGT TGTTACCCTC TAAATACCAT CCCAGTTGGA TGAATATGTT TATGCTTCAC
TCATCGCTAA GTGATCAGGA CTTGAAGGTG GCAATAGATG AAAACAGAGA AAAAATAGAC
CGACTACTGC AGGTCTATGC AGAATTTTTT TCGAGTAAAT ATATTCATCT GTTAAATCCG
ATATTTAATT TTAATTGTTT GACAACGACC AGTATTAAGA TATTGAAGTT GGCGGCAGAG
GGCACCTCGA GTCCGGATAT TGCCAAGTCA CTCTATTTAA CTGAAAGGGG AGTCAATTAT
CATATTGACA GGATGAAGGT GCTGTTTGGG GCTAAGAACA GGGTGCAGTT AATAAGTCGC
GCCTTTCAGA TAGGGATTCT GAACGCGATG CCACAACCTT CCTCAATATT GTGA
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| Protein sequence | MHDDSIQTKM CLFSQCFYLV TILTENCPLS VGIIQDFLAS LEALGINGFF YGITSNINLG
QVHPFKKLEK RLPLEMAKVH YAVFSDERTR LYRDAYLNVF ARHDEYYFEK KVVGPNLWRQ
PDASQAQLLN LLKDNEINSR VAWLLPSKYH PSWMNMFMLH SSLSDQDLKV AIDENREKID
RLLQVYAEFF SSKYIHLLNP IFNFNCLTTT SIKILKLAAE GTSSPDIAKS LYLTERGVNY
HIDRMKVLFG AKNRVQLISR AFQIGILNAM PQPSSIL
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