| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2101 |
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| Symbol | |
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| ID | 5612297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2542457 |
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| End bp | 2543368 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932998 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473838 |
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| Protein GI | 157375238 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGG AAGACCTTGC CCTATTCAAT ACTGTAGCCG AATTTTCAAG TTTGACCGGG
GCCGCACGAG TACTGAACAT TCCGGTATCT AAGGTGTGTC GACATGTGGC ACAACTGGAA
CAGCACTTAG GCACACGTTT ATTTGAGCGA ACGACGCGAA GCCTATCCCT CACCGATGCA
GGAATAGAGC TTATTCACAG AAGCAAAAAG ATTCTCACAG AAATAGAAGC ACTCGAATTA
AGCATAGGTC AATTGCAAGG GAATACATCG GGTACAGTCA CCATCGCAGC ACCACTGGAT
TTTATAAACT TGACCTGTAA CGAGATGCTG AATAAGTTTT ATCAGCAATA CCCTGGTTTA
CAATTAAAAT TCATCTCCTA TCAAAGTAGA TTGAATCCAA TGGAGATTCA GGCTGATTTG
ATCTTCTTTG TCTCTCATAG CAATCCACCG GATAGCACTA TGGTAGGACA TAAATTATCA
ACAATGAAAC GCCTGTTTAT TGCCAGCCCG GAATTTATAA AAAAGAATCC AGATTTGAAT
CATCCCAAAC AACTGAGTAA TTACCCATGT TTACTTTCAT CAAAGGGAAT ACAACCCGGA
CATGTTTGGT TATGGACTGA TGAGAATCAT TCCAATTGTA TAAATGTCGA TGGCCCCCTC
GAATCGGAAA GCAATGAGCT TTGCATTTCG GCTGCGATAA GTGGTCAAGG CATCGCCTGG
GTACCGAGAG AGATGTGTAA CGAACAAATT AAATCCGGGA AATTACAGTT ATTATTCGAT
GGGGAATATG GCACCGATGT TTATATGTGG TCACTATTTT CAAGCAGAGA ATATCTCCCC
CATAGAGTAA AAGTTGTTCT GGAATTTTTT AAGAAAGAGA TCGGTATTTT ATTGCAGCAG
TCGATTGAAT AA
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| Protein sequence | MKTEDLALFN TVAEFSSLTG AARVLNIPVS KVCRHVAQLE QHLGTRLFER TTRSLSLTDA
GIELIHRSKK ILTEIEALEL SIGQLQGNTS GTVTIAAPLD FINLTCNEML NKFYQQYPGL
QLKFISYQSR LNPMEIQADL IFFVSHSNPP DSTMVGHKLS TMKRLFIASP EFIKKNPDLN
HPKQLSNYPC LLSSKGIQPG HVWLWTDENH SNCINVDGPL ESESNELCIS AAISGQGIAW
VPREMCNEQI KSGKLQLLFD GEYGTDVYMW SLFSSREYLP HRVKVVLEFF KKEIGILLQQ
SIE
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