| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2097 |
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| Symbol | |
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| ID | 5610274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2537859 |
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| End bp | 2538755 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640932994 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473834 |
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| Protein GI | 157375234 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.154487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGTG AAATAGTTAA TGTTGATTTC GTTAACTCTT TTAGTCATGG AGAGTTTGTT
GTAACCACGA TATCTGACTT CTTCGAAAAT GAGTCTCTGT ATAATGTACA ACCTTACATT
CCTCACAGAC TCACTTTTTT TGCTATTGTC TTTTTCACCG GTGGAAAAGG TAGCCACAGT
ATTGATTTTA CAGATTTTAA ATATGAAGGC GCTTCATTAT TCTTTATCTG TAAAGGTCAG
TTACATGCCT TTGAAAAAAA TGAAGCTGCT CAAGGTTATG TTGTCTACTT TACTGAAGAA
TTTATCAACA AAAATATCAA AGGGTTGAGT GATAAGCTTT ACTATAAAAT GTTTAACTAT
GCGCTGAACT CTCCTCAGTT ACCCATATCT GAACTGGATA ATGCCAGAAA AGATGCGACT
TCACTGTTTG ATATCATGTA TCACGAATAT AGTCGGCCAG ATGATATTTG TCAGGAGGAG
ATTATTCGTG GCTTACTCGG TGTTTTATTG AGTTTTGTTG AACGTATACA AACGAAGAAC
AATATGTTTT TGACAGATCA TCAGGGACAT GCTTTGTTTT TAAAACTACA AAAAATGATT
GATGAAAAAC TTTTTGAGTC GCGAACGTCA CATTTTTATT GTGAAAATTT AAACGTCAGC
TATCGAAAGT TAAATGCTGT CTGTAAAGAG TTTACCGATA TGACGGTGAG GCAGTTTATA
GATGAGCGTT TAGTACTGGA AATAAAGCGA TATTTAGCGC ACTGTGACTT CAGTATCAAA
GAGATCTGTT ATAAAACCGG ATTTGATGAA CCCACAAATA TGACAAAGTT TTTTAAATGT
CACACCGGGA TGTCACCTAA AGAGTTTCGA TTAACGGTCT CGCATAAACA TAGTTAA
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| Protein sequence | MKGEIVNVDF VNSFSHGEFV VTTISDFFEN ESLYNVQPYI PHRLTFFAIV FFTGGKGSHS
IDFTDFKYEG ASLFFICKGQ LHAFEKNEAA QGYVVYFTEE FINKNIKGLS DKLYYKMFNY
ALNSPQLPIS ELDNARKDAT SLFDIMYHEY SRPDDICQEE IIRGLLGVLL SFVERIQTKN
NMFLTDHQGH ALFLKLQKMI DEKLFESRTS HFYCENLNVS YRKLNAVCKE FTDMTVRQFI
DERLVLEIKR YLAHCDFSIK EICYKTGFDE PTNMTKFFKC HTGMSPKEFR LTVSHKHS
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