| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2096 |
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| Symbol | |
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| ID | 5610273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2536919 |
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| End bp | 2537584 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932993 |
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| Product | ABC transporter related |
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| Protein accession | YP_001473833 |
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| Protein GI | 157375233 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.180446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTCAT CAACACCTCT TATCGCGCTT AAGGGCGTCA GTTTCCAACA CGCGGATGAA
AGTGTTACTG CCAACAAGCT GGATTTTGAG CTCTACAGTG GCCAGAGTGT GGCGATATCG
GGAATAAATG GTAGCGGAAA AAGTACCTTA CTCTCCCTTA TTATGGGGCT GAGAAGCGTC
AGTTCAGGTG AAGTGTACCT GTTTGGCCAC TCTTGCCGTA CAGAGGCTGA TTTCAGTCGC
TTCAGAACCC GTATCGGTAT GGTCTTTCAA GATCCTGACG ATCAGCTTTT TTGTCCGACC
GTAATTGAAG ATGTTTGCTT TGGCCCGCTC AATCAGGGGT TAACGCGAAC GGATGCAATA
GTTAGAGCCA GAAAAATACT TAAGCAGCTT AATGTTAGCC ATCTTGAGAA CAAAATTACT
TATCAATTGT CCGGTGGCCA GAAAAGGGTA GTGGCGTTGG CAAGTGTCCT CGCGATGAAA
CCTGAGATAT TGTTGTTAGA CGAGCCGACA AACGATTTAG ACCCGGAAAA TACACGGCGG
CTGATTGATA TTTTAAGGGA GCTGTCGCTG CCTATGATTT TGATCTGCCA TGATGCCAAT
ATTTGTGCGC AACTGGTAAA TAAAGAGTAC CAGTTAACTC AGGGGACCAT GGTTGCCTTG
CCTTAG
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| Protein sequence | MSSSTPLIAL KGVSFQHADE SVTANKLDFE LYSGQSVAIS GINGSGKSTL LSLIMGLRSV
SSGEVYLFGH SCRTEADFSR FRTRIGMVFQ DPDDQLFCPT VIEDVCFGPL NQGLTRTDAI
VRARKILKQL NVSHLENKIT YQLSGGQKRV VALASVLAMK PEILLLDEPT NDLDPENTRR
LIDILRELSL PMILICHDAN ICAQLVNKEY QLTQGTMVAL P
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