| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2078 |
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| Symbol | |
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| ID | 5610515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2516697 |
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| End bp | 2519387 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932975 |
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| Product | GCN5-related N-acetyltransferase |
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| Protein accession | YP_001473815 |
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| Protein GI | 157375215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0450979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.503964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC GTACACTGCA TACTTTGTTT AAACCAAAAT CTGTCGCCAT TATCGGAGCC
TCCAATACCG AAAAACGTGC AGGTAACGTG GTGATGAAAA ACTTGCTTGC AGGTGGCTTT
TCTGGCCCCA TCATGCCGGT AACCCCTAAG TATGAAGCGG TACTCGGCGT ACTCGCCTAC
CCCAATATCG AAGCCCTCCC CCTAAAACCC GATCTGGCCA TCATCTGTAC AGCCGCTTTT
CGTGTACCCG GTGTCGTGGA AACCTTGGCT CAGTTTGGCT GTAAAGTGGC CATCATAATG
GCCTCCGGCA TGGCCAGCCA TTTCAACGAT GAAGGAGTAA GTTTCCTGGA GGAGGCGCGG
CTCAATGCGA AGCGCTATGG CATGCGTATA CTGGGTCCTA ACAGCCTGGG AATGATGCTG
CCAAACCTCG GCTTAAACGC GAGCCTAGCT CATGCCAGTG CCCTGCCCGG CAAAATTGCA
TTTGTGTCCC AATCGGCGGC GATATGCACA ACCGTACTCG ATTGGGCCAA TAATAAGGGG
ATCGGCTTCT CTTCGTTTAT CTCATTAGGC GATGCGACCG ATATCGATTT CGACGAGCTG
CTGGACTATC TGGGCCGGGA CTCGAGAACC AACGCAATCA TGCTCTATGT CGATTCCATT
AATGAAAAAC GTCACTTCCT GTCGGCGGCT CGGGCCGCCT CACGCAATAA ACCCATCTTG
GTGATCAAAT CGGGTCGTAG CTTAGAGGGC ACAAACGCCG CTAAACTCCA CACAGGTGGT
GTAACGGGTA ACGATGCCGT TTATGAAGCC GCTTTCAGGC GTGCCGGAAT GCTCAGAGTC
AACGATCTTA TCGAACTGTT TGCCGCCGTC GAAACCCTCG CCCACTCCTC CCCTCTGCTT
GGTGAGCGAC TCGCTATCGT CACCAACGGC GGCGGACCCG CAGTACTCGC CCTGGATCAA
CTCATGCTTG GTGGTGGAAA ATCTGCCAGC CTCAACAGCA ATACTTTAAA CTTACTCGAT
GAGCTACTTC CCTCAACCTG GTCCGGTCAA AACCCGATAG ATATTGGCGG GGATGCCGAT
GCTAAGCGCT ACACCAAAGC GGTTGAGATA ATGATGGACA GCGATGACGC CGATGCGATC
CTGGTGCTAC ATTCCCCTTC GGCGCTGGGG GACAGTGTCG AAATAGCCAA TGCACTCGTA
GAGATGGTTG CCAAGCATCC TAAGAGGAAC AAGGTCAACG TGCTCACCAA CTGGAGTGGT
GAAGATTCGG CGTATCCGGC CAGAAAACAT TTTAACCGAA CAGGGATCCC GACCTATAGA
ACACCCGAAG GTGCCGTCGG TGCATTTATG CATATGGTCG AGTACCGCAG AAACCAGAAA
TTACTGCAAG AGGTCCCCCA ATCTATACCG GATAATATTC CTACCAATGC AGAACAAGCC
AGAGCACGAC TCGCTAAGGC GCTTGGACTA GGTAAGAGGA TTCTTGAGAC ACATGAGTCT
CAGGAGATCC TCAGTGCCTA TGGACTCAAT ACTATCGACA CCTATGTCGC CAACACCCCG
GAAGATGCGG TGACTGTGGC CAATAAGATT GGCTATCCGG TGGCAGTCAA GGTTCAGTCG
CCAGACATAC ACCATAAATC AGATGTGCAT GGCGTAATGC TCAACCTGAC GTGCGAAGAT
GAAGTGATCC AGGCGGCAAC GGCTATCCGA TCACGGGTAC TATTAACCAA CCCCGATGCC
AAACTTGAGG GGCTGATAGT ACAGAAGATG GCATTAACCG CGGGTGCACA GGAGATCCGG
GTTGCAGTCA TTAACGATCC CGTCTTTGGA CCGGCGATCT TACTGGGTGA AGGCGGCTCA
GAATGGGAAC CGACTAAAGA TGCGGTGGTA GCACTTCCCC CATTGAATAT GACGCTTGCC
CGCTATATGG TGATCCAGGC GCTAAAAACA CAGAAGTTAC GAGACCGACA TCTTCCATTA
GGGTTAAACA TGCACGCCCT GTGTGTCATG TTAACTCAGA TTTCTCATTT GATAATTGAC
TGTCCCGAAA TTTCCAGTCT CGACCTTAAC CCTGTGCTGT GCGCAGGTGA AAACGTCACG
CTTCTCGATG TCAATATTCA GCTCCACGAC ACACCAGTGG ACAATGCATC CAGGCTAGCG
ATATCGCCCT ACCCCAAAGA GCTGGAGCAA GCAGCCACCC TAAAGAATGG TCGGGATGTC
ATGCTCAGAC CCATTTTGCC TGAGGATGAA CCTAAACATT TGGCCTTCGA TAACTCCCTA
TCCGACGAAG ACAGATACAA GCGTTACTTT GGCGTTCGCT CTAAGATGAC CCATGAAGAG
ATGGCGGTAC TGACACAGAT TGACTATGCA CGCGAGATGG CCTTTATTGC TACCGCTAAA
GGTGATGACG GCGAAGAGAT AACACTGGGG GCGATCAGAG CCTCTATCGA TCCTGATAAT
ACCGAGGCCG AGTTTGCCAT GGCAGTCAGA AGCGATCATC AGGGACAAGG ACTGGGCAAG
CTGCTGCTTG AAAAGTTAAT CACCTACTAC AAAGGCAATG ATACCCAGGT ACTTACCGGA
TTTACCATGT TCGAAAATCG TAGCATGGCT AACTTAGCCA AACGGTTAGG TTTTACGGTC
ACATTCGATA TGGAAGAACA TCTGATCAAG ATGGATATGA AATTGAGATA A
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| Protein sequence | MSQRTLHTLF KPKSVAIIGA SNTEKRAGNV VMKNLLAGGF SGPIMPVTPK YEAVLGVLAY
PNIEALPLKP DLAIICTAAF RVPGVVETLA QFGCKVAIIM ASGMASHFND EGVSFLEEAR
LNAKRYGMRI LGPNSLGMML PNLGLNASLA HASALPGKIA FVSQSAAICT TVLDWANNKG
IGFSSFISLG DATDIDFDEL LDYLGRDSRT NAIMLYVDSI NEKRHFLSAA RAASRNKPIL
VIKSGRSLEG TNAAKLHTGG VTGNDAVYEA AFRRAGMLRV NDLIELFAAV ETLAHSSPLL
GERLAIVTNG GGPAVLALDQ LMLGGGKSAS LNSNTLNLLD ELLPSTWSGQ NPIDIGGDAD
AKRYTKAVEI MMDSDDADAI LVLHSPSALG DSVEIANALV EMVAKHPKRN KVNVLTNWSG
EDSAYPARKH FNRTGIPTYR TPEGAVGAFM HMVEYRRNQK LLQEVPQSIP DNIPTNAEQA
RARLAKALGL GKRILETHES QEILSAYGLN TIDTYVANTP EDAVTVANKI GYPVAVKVQS
PDIHHKSDVH GVMLNLTCED EVIQAATAIR SRVLLTNPDA KLEGLIVQKM ALTAGAQEIR
VAVINDPVFG PAILLGEGGS EWEPTKDAVV ALPPLNMTLA RYMVIQALKT QKLRDRHLPL
GLNMHALCVM LTQISHLIID CPEISSLDLN PVLCAGENVT LLDVNIQLHD TPVDNASRLA
ISPYPKELEQ AATLKNGRDV MLRPILPEDE PKHLAFDNSL SDEDRYKRYF GVRSKMTHEE
MAVLTQIDYA REMAFIATAK GDDGEEITLG AIRASIDPDN TEAEFAMAVR SDHQGQGLGK
LLLEKLITYY KGNDTQVLTG FTMFENRSMA NLAKRLGFTV TFDMEEHLIK MDMKLR
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