| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2000 |
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| Symbol | |
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| ID | 5613582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2421529 |
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| End bp | 2422308 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932886 |
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| Product | glutamine amidotransferase, class-II |
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| Protein accession | YP_001473737 |
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| Protein GI | 157375137 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0121] Predicted glutamine amidotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.249396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000243936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTGTGAAC TACTGGCGAT GAGTGCCAAT GTGCCGACAG ATATTGTTTT TAGCTTTACC
GGCCTGGCTC AAAGAGGTGG TGTCACAGGC CCTCATGTCG ATGGTTGGGG GATCACCTTT
TATGAGGGAA AGGGAAGTCG TACCTTCAAA GATGCCTGCC CAAGTAGCGA ATCTCAAATT
GCGAAGCTGA TCCAATCCTA CCCAATAAAG AGTGAAGTGG TGGTGAGCCA TATTCGGCAG
GCTAATCGTG GGTGTGTATC CCTTGAGAAT ACTCATCCCT TTACCCGTGA ATTATGGGGA
AGGTATTGGA CCTACGCGCA TAACGGTCAG CTGAGTGAAT ACCAGGATAA ATTTAAGGTT
TCAAGGTATC AGCCGGTCGG TGATACCGAT AGTGAGCTCG CTTTTTGCTG GTTATTAGAG
AAAGTTGTCG AAAAATTTGG CGATAACGAG CCGGAGGATA TTACACTCGT TTATCATTAT
ATAGCCAAGC TAGCCGATGA AATTCGTGCC TTAGGTGTGT TCAATATGAT CTTAAGTGAT
GGCGAACATT TGATGAGCTA TTGCAGTAAT AACTTGTGCT ATATCACGCG TAAGGCACCG
TTTGGTAAGG CTCGACTCAT AGACACCGAT GTTGTTATCG ATTTCGATAA AGAGACGACG
GCCAATGATA TAGTCACTGT GATAGCCACC AGGCCATTAA CTAATAATGA GCATTGGCAC
ATATTATCCG CCGGGGAATG GAAGCTGTTT TGTAAAGGAC TGCTGATAGG TGCTCAGTGA
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| Protein sequence | MCELLAMSAN VPTDIVFSFT GLAQRGGVTG PHVDGWGITF YEGKGSRTFK DACPSSESQI
AKLIQSYPIK SEVVVSHIRQ ANRGCVSLEN THPFTRELWG RYWTYAHNGQ LSEYQDKFKV
SRYQPVGDTD SELAFCWLLE KVVEKFGDNE PEDITLVYHY IAKLADEIRA LGVFNMILSD
GEHLMSYCSN NLCYITRKAP FGKARLIDTD VVIDFDKETT ANDIVTVIAT RPLTNNEHWH
ILSAGEWKLF CKGLLIGAQ
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