| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1969 |
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| Symbol | |
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| ID | 5612247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2379071 |
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| End bp | 2379772 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932853 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473706 |
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| Protein GI | 157375106 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.894379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACACT TTGATTTTGT TTATGTTGTA TTGCCAAAAC AGGGCATAAG AAAAAAACTA
TCTGGTTCGA GAGTATCCGA TAACAAAATG GCCACGAATA CCCGTAAATC TCCTTTATTT
TGCACTTCAG ATAAGTCAAA AAAAATGTTC CTGACACTCA AATACATGGC CTCTCTCTGG
CCAGAAGTCA TTCCTGATTT TCAGATTAAT GGAAATGCCT GGCCCAAGGG ATTCTATACA
GGTAGCAATC TCCAAGGTGA TACTGCGTTT CATCAAAAGC TGAAAACTCT CAAATCAGCG
AACGACTCAA TGAAGATAGT CGTACAGTAC TACTGTATTT CTCCTGACGA TAATTTTATT
GGGTTATTTT TTGTAATGCA CCAGGGTTCT GAGCTGACAG AGTCGTTAAG AGAAAGTATA
AATCAGCCTT GGGTCGCTGC TCTGTTGGAA CTTACCCATT TCTATATGAC GCGAAAGTAT
CCGAGTCTCA CAAACCCTAA CCTTTACAAT GGAAGCATCA GGGAGAAAAC ATTAAAAATA
TTGGAGCATA CTGCGGCGGG TATGAATTAC CGTGACATCG GTGAAGCGCT TCATCTGACA
GAGCGAGGGG TTCACTATCA CATCGATCGG GCAAAGTTAT TATTGAATGC TACAAATAAG
GCTGACTTGG TCAGAATCGC GAAAGAGTGC TGCCTGATCT AG
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| Protein sequence | MEHFDFVYVV LPKQGIRKKL SGSRVSDNKM ATNTRKSPLF CTSDKSKKMF LTLKYMASLW
PEVIPDFQIN GNAWPKGFYT GSNLQGDTAF HQKLKTLKSA NDSMKIVVQY YCISPDDNFI
GLFFVMHQGS ELTESLRESI NQPWVAALLE LTHFYMTRKY PSLTNPNLYN GSIREKTLKI
LEHTAAGMNY RDIGEALHLT ERGVHYHIDR AKLLLNATNK ADLVRIAKEC CLI
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