| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1966 |
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| Symbol | |
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| ID | 5611457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2375636 |
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| End bp | 2376625 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932850 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473703 |
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| Protein GI | 157375103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAA ACGGCACTAA GGAAAGCAGG TTTACCCTCT GGTGGGCTCA ATGGCTCAAC
AGACGACTGC CTCCGGCTGC AAGAGTGACC TTAGCCCATA AAAGTATCTT TATACTCCCG
ACGGGCTTTG GTTTGTTCTG GATATTTCTG GTGTTAATTT TATTTGTATT TGGCACCAAT
TATCAAAATA ACTTAGTCAT AGGGTTAAGC ATACTACTAC TGAGTCTGTT TAATACCTGT
ATCATCTACA GCTACCGTAA TCTTGCCGGG CTCACCTTAA ACGCTTGTGC CTCTCCCCAG
GCCTATGCCG GAGAAACACT CGTGTTTCCG GTAAAACTCA CCTCCTCTCA GCCCCAGTTT
GAAGTGCTGG TTAACTATCC TGACAACCAG ATTAAAGTGA TAAAAACTAT CGGTGAAGAG
CCTACAGTGA CACTGGTTCC ATTCGATAAC CTTATCCGGG GCCGGGTCTC CCCGGGTCGT
CTAAAAATAG AATCCCGGTA TCCACTCGGG CTATGCAGAG CCTGGTCACA TGTAAACCTT
GATAATCCGC ACATTGTTTT TGCCAAGCCC TTAGTGTCTC ATTCACAGCT TAAATCGATC
GATGCCGATA ACCAGAACAT CACTGGCGAC AGAGGCATGC ATATTCCCGG AGTCGATGAA
TTTAAAGGGC TTAAGCAACA TATCCCGGGA GAATCCTTGA GACAGGTTGC ATGGAAACAA
CTCGCCCAGG GACGAGGCAT GCTGAGTAAA GAGTTTCAGC AGCCTCAGGG AGAGCCCCAC
TGGTTAATCA TTGAAGATTT GAGCTCTCCC GATCTTGAAA AGCAATTGAG CGAACTGACC
TGGGCAATCG ACAAAATGAG CGGGCGAGGA CAAGTTTTCG GCCTGGTTAT TAGCCGGAAA
AAAATTCCCC CCGCAGAAGG AGATGTACAC CGCATACACT GTCTACAGGA GCTTGCCCTG
CTTCCCCAGT TCGTAGGGGG AGACTCATGA
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| Protein sequence | MKRNGTKESR FTLWWAQWLN RRLPPAARVT LAHKSIFILP TGFGLFWIFL VLILFVFGTN
YQNNLVIGLS ILLLSLFNTC IIYSYRNLAG LTLNACASPQ AYAGETLVFP VKLTSSQPQF
EVLVNYPDNQ IKVIKTIGEE PTVTLVPFDN LIRGRVSPGR LKIESRYPLG LCRAWSHVNL
DNPHIVFAKP LVSHSQLKSI DADNQNITGD RGMHIPGVDE FKGLKQHIPG ESLRQVAWKQ
LAQGRGMLSK EFQQPQGEPH WLIIEDLSSP DLEKQLSELT WAIDKMSGRG QVFGLVISRK
KIPPAEGDVH RIHCLQELAL LPQFVGGDS
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