| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1963 |
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| Symbol | |
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| ID | 5611537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2369778 |
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| End bp | 2371508 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932847 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001473700 |
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| Protein GI | 157375100 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG0631] Serine/threonine protein phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT CCAATCGTCT AAGCATAAAT CTGGCAAGCC ATAGCGAAAA AGGTTTAAAG
GAGATTAATG AAGATGCGGT TGGATTTTTT GTCCCCACCG AAGATAGGTT ATTAGAGGGT
AAAGGGATCA TTCTTGCCGT CGCCGATGGT GTGAGTAGCG CCGAAGCGGG TAAAGATGCC
AGTGAAACTG CGGTAAAACG CTTCATCGAC GACTACTACC CTACCCCGGA TACCTGGTCA
GTAAAACATG CTGGGCAAAA ACTACTCTCA AACATCAACA TTACCCTTTT CAAACGTAGC
CATGAGTTTG CCAATGAGGA GAAAGGTTAT CTGACAACCT TCAGCGGCTT GGTGATTAAA
TCTCGTACCT GTCATCTCTT TCATGTCGGT GATAGTAGAG CCTACCTGTT CCGTAATAAT
GAACTCAAGC AACTGACAAG AGACCATGTT GCCAGCATTG CGACAGGGCG AAGCTTTTTA
GCCCGTGCGG TGGGCATGGA TAACTGTCTG CAGATAGATT ACAGCACAGT GGATCTGGAA
GATAACGATC TGTTACTGGC TACCTCAGAT GGGATCCATG ACTTTCTCGA ATTGGATAAA
CTTACCGAAA TTCTCTCGTT AAACATTTCT GAACAGGAAA AAATCGATCT GTTAGCCAAA
ACCGCATTCG ATAATGGCAG CGACGATAAT ATCAGCGGGG TTATTGCTCA GGTCAATCAG
CTTCCAAATG AAAGTCTCAA CGATTACAAC TCAAAATTAT TGCGCTTACC TTTTCCGCCA
CCACTGGACC CGGGGGTGAA GCTCGATGGC TATAAGGTTA TCAAGGAGTT ATTTGCCAGT
AGTCGCAGTC AGCTCTATCT GGTCGAAGAC ACGGATAGCG GCGAACAGAT GGTGATGAAA
ACCCCGTCAA TCACCTTTGA AGAAGACACT GGCTATATCG ATAGATTTAT ACAAGAGGAG
TGGATTGGCA AACGGATTAG TAGTGAATAC GTCGTCAAGA TAATCGAGCA AAAAAGACCG
AGAACCTGTT TATATTATCT GATGGAGTAT GTGCACGGCA TATCGATGGA TAAGTGGATG
AAACAAAACC ACTTTCCTAA GCCAAAGGTG GCGATCTCTA TTATTGAAAA AATTGCGAAG
GGATTAGCAG AGTTCCACAA AACAGAAACC ATTCACCAGG ACTTAAAGCC GGCCAATATC
TTGATCGATA CCCATAACAA CATAAAGATT GTGGACTTCG GTTCGGTCTT TGTTGCTGGC
CTTGCTGAGA TATTTATTCC ATTAGAGCAT GAGGGAGTAC TTGGAACCGC AACTTACTCA
GATCCCAAAT ACCTGCTTGG TAAAAATACG GGTATCCAAG GCGATCTGTA CGCCTTGGCC
ACCATCAGCT ATGAGCTATT TTGTGGCAAA CTCCCCTATG GTGAAAAGAT TGAGGAGTGC
CAAACGGCTT TTGAATACGA CAGACTTCGC TACATCCCCG CCAATGAAGT CAACCCTGTT
ATCCCTATGT GGTTTGACAG AACACTTCAG CGAGGCGTCG CCTTCGATTT AGAGGAACGG
TATGAAAATA TCGATGAATT TTTAACGGAC TTAAAAAATC CAAACCCGGT CTACCTGCGT
GATGATCCCA AGGTGACTAA AAATAAGAGT CAGGTGTTAT TCTGGCAATT ATTATCAGGC
TTCTGGATCC TCATGTTGAT CCTGGTCATC GCCATGTTTA AGCAAGGGTG A
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| Protein sequence | MTKSNRLSIN LASHSEKGLK EINEDAVGFF VPTEDRLLEG KGIILAVADG VSSAEAGKDA
SETAVKRFID DYYPTPDTWS VKHAGQKLLS NINITLFKRS HEFANEEKGY LTTFSGLVIK
SRTCHLFHVG DSRAYLFRNN ELKQLTRDHV ASIATGRSFL ARAVGMDNCL QIDYSTVDLE
DNDLLLATSD GIHDFLELDK LTEILSLNIS EQEKIDLLAK TAFDNGSDDN ISGVIAQVNQ
LPNESLNDYN SKLLRLPFPP PLDPGVKLDG YKVIKELFAS SRSQLYLVED TDSGEQMVMK
TPSITFEEDT GYIDRFIQEE WIGKRISSEY VVKIIEQKRP RTCLYYLMEY VHGISMDKWM
KQNHFPKPKV AISIIEKIAK GLAEFHKTET IHQDLKPANI LIDTHNNIKI VDFGSVFVAG
LAEIFIPLEH EGVLGTATYS DPKYLLGKNT GIQGDLYALA TISYELFCGK LPYGEKIEEC
QTAFEYDRLR YIPANEVNPV IPMWFDRTLQ RGVAFDLEER YENIDEFLTD LKNPNPVYLR
DDPKVTKNKS QVLFWQLLSG FWILMLILVI AMFKQG
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