| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1955 |
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| Symbol | |
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| ID | 5614021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2363372 |
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| End bp | 2364910 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932839 |
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| Product | respiratory nitrate reductase beta subuni |
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| Protein accession | YP_001473692 |
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| Protein GI | 157375092 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1140] Nitrate reductase beta subunit |
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| TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.089713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC GTTCTCAAAT CGGTATGGTA CTGAACCTTG ATAAGTGTAT CGGGTGCCAT
ACATGTTCAA TTACATGTAA AAATGTATGG ACGTCTCGCG AAGGCGTCGA GTACGCCTGG
TTCAACAACG TTGAAACCAA GCCCGGCATA GGTTATCCCA AAGAGTGGGA AAACCAGGAT
AAATGGAATG GCGGCTGGGA GAGAAAATCT AACGGTGATA TTCAGCCCCG TATCGGTGGT
AAGTATCGTG TGTTAGCCAG CATCTTCGCT AATCCGGATA TGCCAGAAAT TGACGACTAC
TACGAGCCGT TCGATTTCGA TTATCAGCAT CTGCATACGG CGCCTATCGT CGAGCATCAG
CCGACAGCAC GTCCACGCTC GGTCATCACC GGTAAGCGAA TGGAGAAGAT TGTTTGGGGG
CCAAACTGGG AAGAGATCTT AGGTACTGAG TTCGAAAAGC GTAGCAAAGA TAAAAACTTC
GATAACATGC AAAAAGAGAT GTATGGCGAG TTCGAAAATA CATTCATGAT GTATTTACCG
CGTCTTTGTG AGCACTGTTT GAACCCGGCT TGTGTGGCTT CTTGCCCATC GGGTGCTATC
TATAAGCGTG AAGAAGATGG CATCGTCTTG ATTGACCAAG AGAAGTGTCG TGGTTGGAGA
ATGTGTATCT CTGGATGCCC ATACAAGAAG ATCTACTATA ACTGGAAATC GGGTAAATCA
GAGAAGTGTA TCTTCTGTTA TCCACGCATC GAAGCGGGTC AACCAACGGT TTGTTCTGAA
ACCTGTGTGG GCCGTATTCG TTACCTTGGT GTGCTGCTTT ATGATGCAGA CAAGATCAAA
GAGGTGGCTT CAACGGCCAA CGAAACTGAC TTGTACGAGA AGCAGCTCGA AGTGTTCCTC
GACCCAATGG ACCCAGCCGT CATTGCACAG GCTCGTAAAG ATGGCATCGC GGACTCAGTT
ATCGAGTCGG CGCAAAAGTC TCCGGTGTAC AAGATGGCGA TGGATTGGAA ACTGGCGCTG
CCGCTTCACC CTGAGTATCG TACCTTGCCA ATGGTGTGGT ATATCCCTGC ACTGAGTCCG
ATTCAGAGTG CGGTTCAAGG TGGCACCTTA GGCAAAGCTG GTGTGATTCC TGATGTACGT
TCACTGCGTA TTCCGGTTAA GTATCTGGCT AACCTGCTTA CTGCCGGTGA TGAAGAGCCT
GTTGTTCGTG CTCTTGAACG TATGCTCGCG ATGCGTGCTT ACAAACGCGC CGAAAATGTA
GAAGGTGTTG AAGACTTAGA GGTGCTTGAG CAAGCGGGTC TGACTAAGAA GCAAGCCGAT
GAGATGTATC GTTACCTTGC AATCGCTAAC TACGAAGACC GTTACGTTAT CCCAAGCGGA
CATCGTGAGA TGAACGTCCC CGAGGCCTAC GGCGAGAAGA GCGGTTGTGG CTTCACATTT
GGCAACGGCT GCAGCGATGG CCAGAACGGT GTAAACATGT TTGGCGGAAA GAAAATTACT
CGTCGTAATG TGATTAAAAC CGTACAAGTA GGAGATTAA
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| Protein sequence | MKIRSQIGMV LNLDKCIGCH TCSITCKNVW TSREGVEYAW FNNVETKPGI GYPKEWENQD
KWNGGWERKS NGDIQPRIGG KYRVLASIFA NPDMPEIDDY YEPFDFDYQH LHTAPIVEHQ
PTARPRSVIT GKRMEKIVWG PNWEEILGTE FEKRSKDKNF DNMQKEMYGE FENTFMMYLP
RLCEHCLNPA CVASCPSGAI YKREEDGIVL IDQEKCRGWR MCISGCPYKK IYYNWKSGKS
EKCIFCYPRI EAGQPTVCSE TCVGRIRYLG VLLYDADKIK EVASTANETD LYEKQLEVFL
DPMDPAVIAQ ARKDGIADSV IESAQKSPVY KMAMDWKLAL PLHPEYRTLP MVWYIPALSP
IQSAVQGGTL GKAGVIPDVR SLRIPVKYLA NLLTAGDEEP VVRALERMLA MRAYKRAENV
EGVEDLEVLE QAGLTKKQAD EMYRYLAIAN YEDRYVIPSG HREMNVPEAY GEKSGCGFTF
GNGCSDGQNG VNMFGGKKIT RRNVIKTVQV GD
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