Gene Ssed_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1930 
Symbol 
ID5611260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2319830 
End bp2320132 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content45% 
IMG OID640932816 
Producthypothetical protein 
Protein accessionYP_001473669 
Protein GI157375069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG AAGTAACAAA TTTACCCGAT CCCCAGATGA CCTGTTCAAC TTGCCAGGCT 
TGTTGTTGCC ACCTCGAAGT GATGATTATC TCTGATACGG GGGTACCGCC TGAATACATA
GTCTCGGATG AGTTTAATGG TGACGTTATG GCGCGTTTAG ATGACGGTTT GTGTATCGCG
GCCGACCGCG ACACCCTGTT ATGTACGATT TACGAAAATC GTCCCTGGAT CTGCAGAGAG
TTTGAAATGG GCTCTTACGA GTGCAGCATC GAACGTAAAA ATATCACTAC CTTAGATAAA
TAA
 
Protein sequence
MTIEVTNLPD PQMTCSTCQA CCCHLEVMII SDTGVPPEYI VSDEFNGDVM ARLDDGLCIA 
ADRDTLLCTI YENRPWICRE FEMGSYECSI ERKNITTLDK