Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1930 |
Symbol | |
ID | 5611260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2319830 |
End bp | 2320132 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640932816 |
Product | hypothetical protein |
Protein accession | YP_001473669 |
Protein GI | 157375069 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTG AAGTAACAAA TTTACCCGAT CCCCAGATGA CCTGTTCAAC TTGCCAGGCT TGTTGTTGCC ACCTCGAAGT GATGATTATC TCTGATACGG GGGTACCGCC TGAATACATA GTCTCGGATG AGTTTAATGG TGACGTTATG GCGCGTTTAG ATGACGGTTT GTGTATCGCG GCCGACCGCG ACACCCTGTT ATGTACGATT TACGAAAATC GTCCCTGGAT CTGCAGAGAG TTTGAAATGG GCTCTTACGA GTGCAGCATC GAACGTAAAA ATATCACTAC CTTAGATAAA TAA
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Protein sequence | MTIEVTNLPD PQMTCSTCQA CCCHLEVMII SDTGVPPEYI VSDEFNGDVM ARLDDGLCIA ADRDTLLCTI YENRPWICRE FEMGSYECSI ERKNITTLDK
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