| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1829 |
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| Symbol | |
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| ID | 5612402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2203465 |
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| End bp | 2203872 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932705 |
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| Product | signal transduction protein |
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| Protein accession | YP_001473568 |
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| Protein GI | 157374968 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0766712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCACC GCAAGATAGT CCGAAATTCA GATGTGATGA CTGAGAAGTT TGTTATGGTT
GACGGGCTTC ATACTGTCGC CGATGCCATC GAGCTCGCCA GCGCCCAAGA CGTGAGAGTA
CTGCTCGTCA ATAAACGTAA TGAAGACGAT GAGTTTGGTA TGGTATTGAT GAGTGATATT
GCCAAGAAGG TGCTGGCAAA AGATAAAGCG CCAGAGCGGG TGAATATCTA TGAGATCATG
ATCAAACCAG TATTATCTGT CAGCCCTGAG ATGGATGTCC GCTATTGTGC TCGTTTGTTT
GAACGATTTC GTATCACAAA GGCGCCGGTG ATTGAGGCAG GTAAAATCTT AGGTTTAGTG
AGTTATCATG ATTTGGTGCT TAAAGGGATG CTGGCTGAAA AGCAGTAA
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| Protein sequence | MSHRKIVRNS DVMTEKFVMV DGLHTVADAI ELASAQDVRV LLVNKRNEDD EFGMVLMSDI
AKKVLAKDKA PERVNIYEIM IKPVLSVSPE MDVRYCARLF ERFRITKAPV IEAGKILGLV
SYHDLVLKGM LAEKQ
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