| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1791 |
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| Symbol | |
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| ID | 5613046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2159056 |
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| End bp | 2159730 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932666 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001473530 |
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| Protein GI | 157374930 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.506547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAATTT TGGTTGTTGA AGATGATCCC CTACTATCCC ACCACCTTAA AGTTCAGCTG
TCAGAACTTG GTAACCAAGT GCAGGTAGCC CTCACGGCCA AAGAGGGATT TTATCAAGCA
ACCAATTATC CCATAGACAT TGCCATCGTC GATTTAGGCC TTCCGGATCA AGATGGGATT
AGCTTAATTC AAAATTTACG GGATGCAGGC TTAAAGGCAC CGGTATTGAT ATTAACTGCC
CGAGTTAACT GGCAAGATAA AGTCGAAGGC CTCAATGCTG GTGCAGATGA CTACCTGGTG
AAACCCTTCC AGAAAGAGGA GCTGGTCGCC AGGCTCGACG CTCTTGTCAG ACGCAGTGCC
GGTTTCGTCA AACCTCAAAT AACCAGCGGT GCGCTGGAAG TTGATCTCGC CGCCAAACAA
GTTTCATTAA ATAACGAGCC CATGGAAGTC ACGGCATTCG AATACTTAAT TCTTGAGTAC
TTAATGCGCC ACTGCCATGA GGTCGTTGCT AAGCAGCGTC TACTCGATGT TATCTATGGT
GATAAAGAGG GTGACCCGAA TACTATTGAG GTGATGGTCT CCAGGCTGAG GAAAAAGCTC
ACGAAAGGGG GAATTGAAAA CCCGGTAGTC ACGATTCGTG GCCAAGGCTA TAAATTTAAC
TTACCTTGTA GTTGA
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| Protein sequence | MRILVVEDDP LLSHHLKVQL SELGNQVQVA LTAKEGFYQA TNYPIDIAIV DLGLPDQDGI
SLIQNLRDAG LKAPVLILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPQITSG ALEVDLAAKQ VSLNNEPMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG
DKEGDPNTIE VMVSRLRKKL TKGGIENPVV TIRGQGYKFN LPCS
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