5 homologs were found in PanDaTox collection
for query gene Ssed_1730 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_1730  hypothetical protein  100 
 
 
91 aa  179  1e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000103931 
 
 
-
 
NC_009831  Ssed_2099  reductive dehalogenase anchoring protein, putative  72.22 
 
 
93 aa  139  9.999999999999999e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3768  hypothetical protein  52.22 
 
 
94 aa  68.6  0.00000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1558  reductive dehalogenase anchoring protein, putative  32.1 
 
 
90 aa  42  0.003  Dehalococcoides ethenogenes 195  Bacteria  normal  0.0340749  n/a   
 
 
-
 
NC_013552  DhcVS_1401  reductive dehalogenase anchoring protein  30.34 
 
 
90 aa  41.2  0.005  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000581103  n/a   
 
 
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