Gene Ssed_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1685 
Symbol 
ID5610069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2019504 
End bp2020109 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID640932555 
Productanthranilate synthase component II 
Protein accessionYP_001473424 
Protein GI157374824 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGT ACCTACTCGA TAACTTCGAC TCGTTCACCT ATAACCTGGT CGACCAATTC 
AGAAGCCTGG GCTTTGAGGT TGTCATCTAC CGCAACGATG TCGATGCCGA TTTTATTGCA
GGCAAAATTC TCAGCGAAAC AGATAATGCT GCACTCGTGC TTTCACCCGG GCCGGGAGCC
CCACATGAAG CCGGTTGCCT GATGGAGCTG ATAGCTAAAG TTGCGGGCAA GGTCCCTATG
TTAGGTATCT GCCTGGGCCA CCAGGCGATG ATTGAACATT TCGGTGGCAA GGTCGAACGC
GCGCCACAGG TTGTGCATGG TAAAGCCAGC CCAACTTATC ATAAACAAGA GGGGATATTC
CACGACCTGC CATCTCCGCT CCCCGTCGCT CGATACCACA GCCTGGTCGC GACTCAGGTT
CCAGACAGCC TCGATGTTAT CGCGACAACG GAAAATATGC CTATGGCTAT TTCACATCGA
CAATACAAAG CCGTCGGCTT TCAGTTCCAT CCGGAATCGA TACTCACCAC CCTTGGCAGC
CAGCTGCTGA TCCAAACGCT TAATTATCTA ACCAGCACTG AAGTAAAAGA GGGAGCAGGC
GCATGA
 
Protein sequence
MKLYLLDNFD SFTYNLVDQF RSLGFEVVIY RNDVDADFIA GKILSETDNA ALVLSPGPGA 
PHEAGCLMEL IAKVAGKVPM LGICLGHQAM IEHFGGKVER APQVVHGKAS PTYHKQEGIF
HDLPSPLPVA RYHSLVATQV PDSLDVIATT ENMPMAISHR QYKAVGFQFH PESILTTLGS
QLLIQTLNYL TSTEVKEGAG A